Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP28Q9H239 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.08■□□□□ 0.48
MMP28Q9H239 AC110285.6-201ENST00000617652 491 ntBASIC18.08■□□□□ 0.48
MMP28Q9H239 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.08■□□□□ 0.48
MMP28Q9H239 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP28Q9H239 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP28Q9H239 PLK5-205ENST00000642079 1969 ntBASIC18.08■□□□□ 0.48
MMP28Q9H239 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP28Q9H239 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP28Q9H239 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP28Q9H239 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP28Q9H239 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
MMP28Q9H239 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP28Q9H239 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP28Q9H239 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP28Q9H239 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP28Q9H239 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MMP28Q9H239 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP28Q9H239 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.07■□□□□ 0.48
MMP28Q9H239 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.07■□□□□ 0.48
MMP28Q9H239 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MMP28Q9H239 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.07■□□□□ 0.48
MMP28Q9H239 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MMP28Q9H239 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.06■□□□□ 0.48
MMP28Q9H239 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
MMP28Q9H239 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.06■□□□□ 0.48
MMP28Q9H239 AC020907.5-201ENST00000624372 1936 ntBASIC18.06■□□□□ 0.48
MMP28Q9H239 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 AC006455.2-201ENST00000429931 906 ntBASIC18.06■□□□□ 0.48
MMP28Q9H239 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.06■□□□□ 0.48
MMP28Q9H239 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP28Q9H239 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP28Q9H239 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
MMP28Q9H239 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.06■□□□□ 0.48
MMP28Q9H239 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MMP28Q9H239 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MMP28Q9H239 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP28Q9H239 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MMP28Q9H239 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MMP28Q9H239 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP28Q9H239 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP28Q9H239 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP28Q9H239 DUX4L19-201ENST00000557448 1267 ntBASIC18.05■□□□□ 0.48
MMP28Q9H239 AL499627.2-201ENST00000606283 725 ntBASIC18.05■□□□□ 0.48
MMP28Q9H239 pRNA.6-201ENST00000610482 90 ntBASIC18.05■□□□□ 0.48
MMP28Q9H239 pRNA.5-201ENST00000612139 90 ntBASIC18.05■□□□□ 0.48
MMP28Q9H239 pRNA.11-201ENST00000618423 90 ntBASIC18.05■□□□□ 0.48
MMP28Q9H239 pRNA.13-201ENST00000619112 90 ntBASIC18.05■□□□□ 0.48
MMP28Q9H239 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
MMP28Q9H239 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP28Q9H239 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP28Q9H239 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MMP28Q9H239 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.05■□□□□ 0.48
MMP28Q9H239 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MMP28Q9H239 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP28Q9H239 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP28Q9H239 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP28Q9H239 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP28Q9H239 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
MMP28Q9H239 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MMP28Q9H239 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 AC004687.1-201ENST00000579003 1625 ntBASIC18.04■□□□□ 0.48
MMP28Q9H239 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
MMP28Q9H239 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP28Q9H239 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP28Q9H239 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms