Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 BID-204ENST00000399767 2129 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SNX5-217ENST00000606557 1087 ntBASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LCE3DQ9BYE3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 AC020907.5-201ENST00000624372 1936 ntBASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LCE3DQ9BYE3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms