Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L2-201ENST00000561772 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L6-201ENST00000626483 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L1-201ENST00000627662 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L8-201ENST00000629013 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L3-201ENST00000630187 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L7-201ENST00000630678 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DUX4L5-201ENST00000630834 1275 ntBASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 KRT18P14-201ENST00000534205 1250 ntBASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RSPO3Q9BXY4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RSPO3Q9BXY4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 AC091799.1-201ENST00000422823 811 ntBASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 MIR2861-201ENST00000636310 90 ntBASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RSPO3Q9BXY4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.92■□□□□ 0.62
RSPO3Q9BXY4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms