Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 AC116050.2-201ENST00000612102 1779 ntBASIC19.64■□□□□ 0.73
NDC1Q9BTX1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 LSM12P1-201ENST00000411836 588 ntBASIC19.63■□□□□ 0.73
NDC1Q9BTX1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 AC098934.4-201ENST00000564127 592 ntBASIC19.63■□□□□ 0.73
NDC1Q9BTX1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDC1Q9BTX1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.62■□□□□ 0.73
NDC1Q9BTX1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 CD99P1-205ENST00000527459 561 ntBASIC19.62■□□□□ 0.73
NDC1Q9BTX1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 KRT18P6-201ENST00000555540 1265 ntBASIC19.62■□□□□ 0.73
NDC1Q9BTX1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDC1Q9BTX1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NDC1Q9BTX1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.6■□□□□ 0.73
NDC1Q9BTX1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDC1Q9BTX1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 AC097658.1-201ENST00000475555 843 ntBASIC19.59■□□□□ 0.73
NDC1Q9BTX1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 AL024507.2-201ENST00000606070 2574 ntBASIC19.59■□□□□ 0.73
NDC1Q9BTX1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NDC1Q9BTX1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms