Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE1Q99829 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CPNE1Q99829 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE1Q99829 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE1Q99829 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CPNE1Q99829 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE1Q99829 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE1Q99829 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CPNE1Q99829 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE1Q99829 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 AC010141.2-201ENST00000452426 721 ntBASIC20.55■□□□□ 0.88
CPNE1Q99829 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CPNE1Q99829 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE1Q99829 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE1Q99829 AL391422.3-201ENST00000603791 2761 ntBASIC20.55■□□□□ 0.88
CPNE1Q99829 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE1Q99829 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE1Q99829 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CPNE1Q99829 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.54■□□□□ 0.88
CPNE1Q99829 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CPNE1Q99829 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.54■□□□□ 0.88
CPNE1Q99829 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CPNE1Q99829 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE1Q99829 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
CPNE1Q99829 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE1Q99829 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE1Q99829 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.53■□□□□ 0.88
CPNE1Q99829 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE1Q99829 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE1Q99829 AL121603.2-201ENST00000557373 2117 ntBASIC20.53■□□□□ 0.88
CPNE1Q99829 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE1Q99829 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPNE1Q99829 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPNE1Q99829 AC092720.2-201ENST00000602388 1665 ntBASIC20.53■□□□□ 0.88
CPNE1Q99829 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE1Q99829 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE1Q99829 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE1Q99829 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CPNE1Q99829 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.52■□□□□ 0.88
CPNE1Q99829 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.52■□□□□ 0.88
CPNE1Q99829 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.52■□□□□ 0.88
CPNE1Q99829 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CPNE1Q99829 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.52■□□□□ 0.88
CPNE1Q99829 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.52■□□□□ 0.88
CPNE1Q99829 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CPNE1Q99829 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE1Q99829 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.52■□□□□ 0.87
CPNE1Q99829 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.87
CPNE1Q99829 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE1Q99829 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE1Q99829 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CPNE1Q99829 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 LINC02228-203ENST00000641970 1355 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 AC105265.2-201ENST00000467189 838 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L2-201ENST00000561772 1275 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms