Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FEM1AP1-201ENST00000431297 1995 ntBASIC19.39■□□□□ 0.69
COL21A1Q96P44 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.39■□□□□ 0.69
COL21A1Q96P44 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL21A1Q96P44 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL21A1Q96P44 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.38■□□□□ 0.69
COL21A1Q96P44 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL21A1Q96P44 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.38■□□□□ 0.69
COL21A1Q96P44 POU5F1P4-201ENST00000413175 1085 ntBASIC19.38■□□□□ 0.69
COL21A1Q96P44 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.38■□□□□ 0.69
COL21A1Q96P44 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL21A1Q96P44 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL21A1Q96P44 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL21A1Q96P44 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.37■□□□□ 0.69
COL21A1Q96P44 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.37■□□□□ 0.69
COL21A1Q96P44 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.37■□□□□ 0.69
COL21A1Q96P44 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL21A1Q96P44 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 AC137761.2-201ENST00000561729 223 ntBASIC19.36■□□□□ 0.69
COL21A1Q96P44 AC145350.3-201ENST00000569033 163 ntBASIC19.36■□□□□ 0.69
COL21A1Q96P44 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 AC120498.10-201ENST00000621827 505 ntBASIC19.36■□□□□ 0.69
COL21A1Q96P44 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL21A1Q96P44 AC121338.2-201ENST00000622535 1744 ntBASIC19.36■□□□□ 0.69
COL21A1Q96P44 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.36■□□□□ 0.69
COL21A1Q96P44 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 KRT18P20-201ENST00000548986 1279 ntBASIC19.35■□□□□ 0.69
COL21A1Q96P44 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.35■□□□□ 0.69
COL21A1Q96P44 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL21A1Q96P44 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 AC022517.1-201ENST00000592429 346 ntBASIC19.34■□□□□ 0.69
COL21A1Q96P44 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.34■□□□□ 0.69
COL21A1Q96P44 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL21A1Q96P44 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms