Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 DUX4L6-201ENST00000626483 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4L1-201ENST00000627662 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4L8-201ENST00000629013 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4L3-201ENST00000630187 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4L7-201ENST00000630678 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4L5-201ENST00000630834 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 AC007952.6-201ENST00000573168 2673 ntBASIC21.12■□□□□ 0.97
C9orf72Q96LT7 AC003957.1-201ENST00000625108 2673 ntBASIC21.12■□□□□ 0.97
C9orf72Q96LT7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.12■□□□□ 0.97
C9orf72Q96LT7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf72Q96LT7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
C9orf72Q96LT7 AL512408.1-201ENST00000569378 2000 ntBASIC21.11■□□□□ 0.97
C9orf72Q96LT7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.1■□□□□ 0.97
C9orf72Q96LT7 KRT18P5-201ENST00000436075 1291 ntBASIC21.1■□□□□ 0.97
C9orf72Q96LT7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 CCDC92B-201ENST00000575506 885 ntBASIC21.1■□□□□ 0.97
C9orf72Q96LT7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf72Q96LT7 LINC02228-203ENST00000641970 1355 ntBASIC21.1■□□□□ 0.97
C9orf72Q96LT7 BX005040.4-201ENST00000637145 1518 ntBASIC21.09■□□□□ 0.97
C9orf72Q96LT7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 AC005224.4-201ENST00000583262 1652 ntBASIC21.09■□□□□ 0.97
C9orf72Q96LT7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf72Q96LT7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms