Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CALR3Q96L12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CALR3Q96L12 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.72■■□□□ 1.07
CALR3Q96L12 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CALR3Q96L12 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CALR3Q96L12 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CALR3Q96L12 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CALR3Q96L12 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CALR3Q96L12 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.72■■□□□ 1.07
CALR3Q96L12 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.72■■□□□ 1.07
CALR3Q96L12 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.72■■□□□ 1.07
CALR3Q96L12 SUDS3P1-201ENST00000505831 966 ntBASIC21.72■■□□□ 1.07
CALR3Q96L12 RARRES2P11-201ENST00000635158 484 ntBASIC21.72■■□□□ 1.07
CALR3Q96L12 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CALR3Q96L12 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CALR3Q96L12 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CALR3Q96L12 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CALR3Q96L12 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
CALR3Q96L12 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CALR3Q96L12 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CALR3Q96L12 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CALR3Q96L12 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.71■■□□□ 1.07
CALR3Q96L12 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CALR3Q96L12 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CALR3Q96L12 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CALR3Q96L12 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CALR3Q96L12 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CALR3Q96L12 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CALR3Q96L12 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.7■■□□□ 1.07
CALR3Q96L12 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.7■■□□□ 1.06
CALR3Q96L12 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALR3Q96L12 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALR3Q96L12 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALR3Q96L12 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.7■■□□□ 1.06
CALR3Q96L12 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.7■■□□□ 1.06
CALR3Q96L12 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALR3Q96L12 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.7■■□□□ 1.06
CALR3Q96L12 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CALR3Q96L12 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
CALR3Q96L12 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CALR3Q96L12 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.7■■□□□ 1.06
CALR3Q96L12 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.69■■□□□ 1.06
CALR3Q96L12 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.69■■□□□ 1.06
CALR3Q96L12 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.69■■□□□ 1.06
CALR3Q96L12 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.69■■□□□ 1.06
CALR3Q96L12 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CALR3Q96L12 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CALR3Q96L12 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CALR3Q96L12 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 AL512408.1-201ENST00000569378 2000 ntBASIC21.68■■□□□ 1.06
CALR3Q96L12 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CALR3Q96L12 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 AFG3L1P-217ENST00000557444 2447 ntBASIC21.68■■□□□ 1.06
CALR3Q96L12 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.68■■□□□ 1.06
CALR3Q96L12 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.67■■□□□ 1.06
CALR3Q96L12 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms