Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.53■□□□□ 0.24
RITA1Q96K30 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.52■□□□□ 0.24
RITA1Q96K30 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.52■□□□□ 0.24
RITA1Q96K30 AL121603.2-201ENST00000557373 2117 ntBASIC16.52■□□□□ 0.24
RITA1Q96K30 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RITA1Q96K30 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RITA1Q96K30 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RITA1Q96K30 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RITA1Q96K30 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RITA1Q96K30 AC073314.1-201ENST00000568729 2216 ntBASIC16.52■□□□□ 0.24
RITA1Q96K30 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RITA1Q96K30 KRT18P11-201ENST00000435214 1283 ntBASIC16.52■□□□□ 0.24
RITA1Q96K30 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RITA1Q96K30 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.52■□□□□ 0.24
RITA1Q96K30 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.52■□□□□ 0.24
RITA1Q96K30 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RITA1Q96K30 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.52■□□□□ 0.24
RITA1Q96K30 AC092437.1-201ENST00000624794 1048 ntBASIC16.52■□□□□ 0.24
RITA1Q96K30 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
RITA1Q96K30 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RITA1Q96K30 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.52■□□□□ 0.24
RITA1Q96K30 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RITA1Q96K30 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RITA1Q96K30 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.51■□□□□ 0.23
RITA1Q96K30 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RITA1Q96K30 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.51■□□□□ 0.23
RITA1Q96K30 DUX4L16-201ENST00000555130 1264 ntBASIC16.51■□□□□ 0.23
RITA1Q96K30 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RITA1Q96K30 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.51■□□□□ 0.23
RITA1Q96K30 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RITA1Q96K30 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.5■□□□□ 0.23
RITA1Q96K30 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
RITA1Q96K30 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RITA1Q96K30 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.5■□□□□ 0.23
RITA1Q96K30 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.5■□□□□ 0.23
RITA1Q96K30 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RITA1Q96K30 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.5■□□□□ 0.23
RITA1Q96K30 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RITA1Q96K30 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RITA1Q96K30 AC027702.1-201ENST00000563810 1770 ntBASIC16.5■□□□□ 0.23
RITA1Q96K30 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RITA1Q96K30 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RITA1Q96K30 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RITA1Q96K30 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.49■□□□□ 0.23
RITA1Q96K30 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.49■□□□□ 0.23
RITA1Q96K30 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.49■□□□□ 0.23
RITA1Q96K30 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.49■□□□□ 0.23
RITA1Q96K30 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.49■□□□□ 0.23
RITA1Q96K30 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RITA1Q96K30 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.49■□□□□ 0.23
RITA1Q96K30 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.49■□□□□ 0.23
RITA1Q96K30 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RITA1Q96K30 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RITA1Q96K30 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms