Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 IRS3P-201ENST00000223076 1006 ntBASIC20.77■□□□□ 0.92
LRRC39Q96DD0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LRRC39Q96DD0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRC39Q96DD0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRC39Q96DD0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LRRC39Q96DD0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LRRC39Q96DD0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 AL121603.2-201ENST00000557373 2117 ntBASIC20.75■□□□□ 0.91
LRRC39Q96DD0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 AC116050.2-201ENST00000612102 1779 ntBASIC20.75■□□□□ 0.91
LRRC39Q96DD0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRRC39Q96DD0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 AC099778.1-201ENST00000568593 1911 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L2-201ENST00000561772 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L6-201ENST00000626483 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L1-201ENST00000627662 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L8-201ENST00000629013 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L3-201ENST00000630187 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L7-201ENST00000630678 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 DUX4L5-201ENST00000630834 1275 ntBASIC20.74■□□□□ 0.91
LRRC39Q96DD0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC39Q96DD0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 LINC02228-203ENST00000641970 1355 ntBASIC20.73■□□□□ 0.91
LRRC39Q96DD0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 MIR2861-201ENST00000636310 90 ntBASIC20.73■□□□□ 0.91
LRRC39Q96DD0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC39Q96DD0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms