Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 TCF3P1-201ENST00000423021 1937 ntBASIC19.54■□□□□ 0.72
LRRC58Q96CX6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC58Q96CX6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 AC131212.1-201ENST00000613771 668 ntBASIC19.53■□□□□ 0.72
LRRC58Q96CX6 AC105233.4-201ENST00000642045 216 ntBASIC19.53■□□□□ 0.72
LRRC58Q96CX6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC58Q96CX6 AC061975.6-201ENST00000579045 1553 ntBASIC19.53■□□□□ 0.72
LRRC58Q96CX6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 EEF1DP3-203ENST00000566025 782 ntBASIC19.52■□□□□ 0.72
LRRC58Q96CX6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 AC053503.5-201ENST00000601508 636 ntBASIC19.52■□□□□ 0.72
LRRC58Q96CX6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC58Q96CX6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC58Q96CX6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC58Q96CX6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC58Q96CX6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC58Q96CX6 SMG8-203ENST00000578922 2178 ntBASIC19.5■□□□□ 0.71
LRRC58Q96CX6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 UNC93B3-201ENST00000308076 687 ntBASIC19.49■□□□□ 0.71
LRRC58Q96CX6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC58Q96CX6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms