Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CLDN23Q96B33 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLDN23Q96B33 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.75■□□□□ 0.91
CLDN23Q96B33 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN23Q96B33 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLDN23Q96B33 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN23Q96B33 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN23Q96B33 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLDN23Q96B33 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN23Q96B33 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CLDN23Q96B33 AC026471.5-201ENST00000615068 467 ntBASIC20.74■□□□□ 0.91
CLDN23Q96B33 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN23Q96B33 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN23Q96B33 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN23Q96B33 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 AL390719.1-204ENST00000412397 1219 ntBASIC20.73■□□□□ 0.91
CLDN23Q96B33 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 KRT18P35-201ENST00000510488 1269 ntBASIC20.73■□□□□ 0.91
CLDN23Q96B33 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 RN7SL850P-201ENST00000579959 291 ntBASIC20.73■□□□□ 0.91
CLDN23Q96B33 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN23Q96B33 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN23Q96B33 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN23Q96B33 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN23Q96B33 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN23Q96B33 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN23Q96B33 PGM5P4-201ENST00000421970 445 ntBASIC20.72■□□□□ 0.91
CLDN23Q96B33 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN23Q96B33 AP003071.4-201ENST00000562276 1284 ntBASIC20.72■□□□□ 0.91
CLDN23Q96B33 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN23Q96B33 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN23Q96B33 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN23Q96B33 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN23Q96B33 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN23Q96B33 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN23Q96B33 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 MMP23A-201ENST00000234610 1017 ntBASIC20.71■□□□□ 0.91
CLDN23Q96B33 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN23Q96B33 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN23Q96B33 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.71■□□□□ 0.91
CLDN23Q96B33 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN23Q96B33 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN23Q96B33 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN23Q96B33 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN23Q96B33 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms