Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP7Q93009 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP7Q93009 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP7Q93009 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.28■□□□□ 0.84
USP7Q93009 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP7Q93009 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
USP7Q93009 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.27■□□□□ 0.84
USP7Q93009 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.27■□□□□ 0.84
USP7Q93009 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP7Q93009 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP7Q93009 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP7Q93009 AC073210.2-201ENST00000430369 194 ntBASIC20.27■□□□□ 0.84
USP7Q93009 AC098934.4-201ENST00000564127 592 ntBASIC20.27■□□□□ 0.84
USP7Q93009 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
USP7Q93009 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP7Q93009 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP7Q93009 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USP7Q93009 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP7Q93009 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP7Q93009 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP7Q93009 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
USP7Q93009 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.26■□□□□ 0.83
USP7Q93009 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.26■□□□□ 0.83
USP7Q93009 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.26■□□□□ 0.83
USP7Q93009 EEF1DP3-203ENST00000566025 782 ntBASIC20.26■□□□□ 0.83
USP7Q93009 SLC7A5P1-201ENST00000568957 537 ntBASIC20.26■□□□□ 0.83
USP7Q93009 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.26■□□□□ 0.83
USP7Q93009 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.26■□□□□ 0.83
USP7Q93009 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.26■□□□□ 0.83
USP7Q93009 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.26■□□□□ 0.83
USP7Q93009 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP7Q93009 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.26■□□□□ 0.83
USP7Q93009 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP7Q93009 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.25■□□□□ 0.83
USP7Q93009 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP7Q93009 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP7Q93009 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP7Q93009 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.25■□□□□ 0.83
USP7Q93009 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.25■□□□□ 0.83
USP7Q93009 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.25■□□□□ 0.83
USP7Q93009 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
USP7Q93009 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.25■□□□□ 0.83
USP7Q93009 AC053503.5-201ENST00000601508 636 ntBASIC20.25■□□□□ 0.83
USP7Q93009 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.25■□□□□ 0.83
USP7Q93009 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP7Q93009 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP7Q93009 AC068338.2-201ENST00000563278 1430 ntBASIC20.25■□□□□ 0.83
USP7Q93009 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP7Q93009 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.25■□□□□ 0.83
USP7Q93009 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.24■□□□□ 0.83
USP7Q93009 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
USP7Q93009 MIR4758-201ENST00000577688 71 ntBASIC20.24■□□□□ 0.83
USP7Q93009 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.24■□□□□ 0.83
USP7Q93009 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP7Q93009 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
USP7Q93009 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.24■□□□□ 0.83
USP7Q93009 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP7Q93009 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
USP7Q93009 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.23■□□□□ 0.83
USP7Q93009 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.23■□□□□ 0.83
USP7Q93009 CYP2T1P-201ENST00000432607 1285 ntBASIC20.23■□□□□ 0.83
USP7Q93009 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.23■□□□□ 0.83
USP7Q93009 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
USP7Q93009 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USP7Q93009 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
USP7Q93009 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP7Q93009 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP7Q93009 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.22■□□□□ 0.83
USP7Q93009 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms