Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
USP6NLQ92738 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USP6NLQ92738 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USP6NLQ92738 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USP6NLQ92738 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USP6NLQ92738 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
USP6NLQ92738 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
USP6NLQ92738 TSPY15P-201ENST00000457163 923 ntBASIC23.42■■□□□ 1.34
USP6NLQ92738 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.42■■□□□ 1.34
USP6NLQ92738 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.42■■□□□ 1.34
USP6NLQ92738 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.34
USP6NLQ92738 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
USP6NLQ92738 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USP6NLQ92738 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
USP6NLQ92738 AC012676.1-201ENST00000574705 1949 ntBASIC23.41■■□□□ 1.34
USP6NLQ92738 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.41■■□□□ 1.34
USP6NLQ92738 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
USP6NLQ92738 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
USP6NLQ92738 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.41■■□□□ 1.34
USP6NLQ92738 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.41■■□□□ 1.34
USP6NLQ92738 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.41■■□□□ 1.34
USP6NLQ92738 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.41■■□□□ 1.34
USP6NLQ92738 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.41■■□□□ 1.34
USP6NLQ92738 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.41■■□□□ 1.34
USP6NLQ92738 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.41■■□□□ 1.34
USP6NLQ92738 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 AC133561.1-201ENST00000568600 2415 ntBASIC23.41■■□□□ 1.34
USP6NLQ92738 AC087633.2-202ENST00000565166 1439 ntBASIC23.41■■□□□ 1.34
USP6NLQ92738 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
USP6NLQ92738 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
USP6NLQ92738 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.4■■□□□ 1.34
USP6NLQ92738 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 FAM99A-202ENST00000538190 1989 ntBASIC23.4■■□□□ 1.34
USP6NLQ92738 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USP6NLQ92738 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
USP6NLQ92738 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
USP6NLQ92738 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.4■■□□□ 1.34
USP6NLQ92738 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USP6NLQ92738 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.4■■□□□ 1.34
USP6NLQ92738 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USP6NLQ92738 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 AC005829.2-201ENST00000571422 1056 ntBASIC23.4■■□□□ 1.34
USP6NLQ92738 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USP6NLQ92738 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.4■■□□□ 1.34
USP6NLQ92738 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.4■■□□□ 1.34
USP6NLQ92738 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.4■■□□□ 1.34
USP6NLQ92738 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USP6NLQ92738 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.4■■□□□ 1.34
USP6NLQ92738 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
USP6NLQ92738 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.39■■□□□ 1.34
USP6NLQ92738 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.39■■□□□ 1.33
USP6NLQ92738 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.39■■□□□ 1.33
USP6NLQ92738 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP6NLQ92738 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
USP6NLQ92738 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.39■■□□□ 1.33
USP6NLQ92738 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
USP6NLQ92738 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
USP6NLQ92738 KRT18P21-201ENST00000515767 1272 ntBASIC23.38■■□□□ 1.33
USP6NLQ92738 AC012306.2-201ENST00000609350 630 ntBASIC23.38■■□□□ 1.33
USP6NLQ92738 AC110285.5-201ENST00000611501 352 ntBASIC23.38■■□□□ 1.33
USP6NLQ92738 AC113410.3-201ENST00000623366 203 ntBASIC23.38■■□□□ 1.33
USP6NLQ92738 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.38■■□□□ 1.33
USP6NLQ92738 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
USP6NLQ92738 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.37■■□□□ 1.33
USP6NLQ92738 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.37■■□□□ 1.33
USP6NLQ92738 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.37■■□□□ 1.33
USP6NLQ92738 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.37■■□□□ 1.33
USP6NLQ92738 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.37■■□□□ 1.33
USP6NLQ92738 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 AP001412.1-201ENST00000608405 714 ntBASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms