Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 BX005040.4-201ENST00000637145 1518 ntBASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM4Q8WVI0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 AC010525.1-201ENST00000585559 441 ntBASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 AC010997.5-201ENST00000609182 354 ntBASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM4Q8WVI0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 AC005332.7-201ENST00000614046 2005 ntBASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 MIR3181-201ENST00000578512 73 ntBASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SMIM4Q8WVI0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM4Q8WVI0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM4Q8WVI0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms