Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4Y2Q8TD47 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.99■□□□□ 0.47
RPS4Y2Q8TD47 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 EDA-201ENST00000338901 1233 ntBASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 AC005837.3-201ENST00000612163 286 ntBASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 RARRES2P11-201ENST00000635158 484 ntBASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4Y2Q8TD47 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 TSPY26P-201ENST00000476365 1326 ntBASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4Y2Q8TD47 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 SMG8-203ENST00000578922 2178 ntBASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 MIR572-201ENST00000384983 95 ntBASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms