Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP003097.1-201ENST00000530657 1135 ntBASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 AL589743.5-201ENST00000616611 1050 ntBASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHKBP1Q8TBC3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHKBP1Q8TBC3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 AC242852.2-201ENST00000615738 1807 ntBASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 KRT18P68-201ENST00000392293 1000 ntBASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHKBP1Q8TBC3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 AC073648.6-201ENST00000641589 218 ntBASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHKBP1Q8TBC3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 AC060766.5-201ENST00000590539 871 ntBASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 HLA-B-256ENST00000639848 1089 ntBASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHKBP1Q8TBC3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 AL158047.1-201ENST00000445918 881 ntBASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.59■■□□□ 1.05
SHKBP1Q8TBC3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 AC142381.4-202ENST00000563973 229 ntBASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 AC008403.3-201ENST00000598924 454 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms