Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM58Q8NG06 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM58Q8NG06 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.83■■□□□ 1.08
TRIM58Q8NG06 TCF3P1-201ENST00000423021 1937 ntBASIC21.82■■□□□ 1.08
TRIM58Q8NG06 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM58Q8NG06 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 EEF1DP3-203ENST00000566025 782 ntBASIC21.81■■□□□ 1.08
TRIM58Q8NG06 AC053503.5-201ENST00000601508 636 ntBASIC21.81■■□□□ 1.08
TRIM58Q8NG06 AC105233.4-201ENST00000642045 216 ntBASIC21.81■■□□□ 1.08
TRIM58Q8NG06 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM58Q8NG06 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM58Q8NG06 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM58Q8NG06 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 SMG8-203ENST00000578922 2178 ntBASIC21.78■■□□□ 1.08
TRIM58Q8NG06 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 AC061975.6-201ENST00000579045 1553 ntBASIC21.78■■□□□ 1.08
TRIM58Q8NG06 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM58Q8NG06 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRIM58Q8NG06 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM58Q8NG06 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.77■■□□□ 1.07
TRIM58Q8NG06 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM58Q8NG06 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM58Q8NG06 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms