Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.09■□□□□ 0.97
PAF1Q8N7H5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PAF1Q8N7H5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PAF1Q8N7H5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.08■□□□□ 0.97
PAF1Q8N7H5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PAF1Q8N7H5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.08■□□□□ 0.97
PAF1Q8N7H5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PAF1Q8N7H5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAF1Q8N7H5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 AC007322.1-201ENST00000426983 750 ntBASIC21.07■□□□□ 0.96
PAF1Q8N7H5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 AC073111.5-205ENST00000641717 521 ntBASIC21.07■□□□□ 0.96
PAF1Q8N7H5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAF1Q8N7H5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 SLC7A5P1-201ENST00000568957 537 ntBASIC21.06■□□□□ 0.96
PAF1Q8N7H5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAF1Q8N7H5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 AC090192.1-201ENST00000517740 490 ntBASIC21.05■□□□□ 0.96
PAF1Q8N7H5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 AC231657.2-201ENST00000624556 255 ntBASIC21.05■□□□□ 0.96
PAF1Q8N7H5 RARRES2P11-201ENST00000635158 484 ntBASIC21.05■□□□□ 0.96
PAF1Q8N7H5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
PAF1Q8N7H5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.04■□□□□ 0.96
PAF1Q8N7H5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PAF1Q8N7H5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms