Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 PLK5-205ENST00000642079 1969 ntBASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 AC005229.4-201ENST00000610085 2198 ntBASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 MIR4758-201ENST00000577688 71 ntBASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 MYC-209ENST00000641252 345 ntBASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 AC121338.2-201ENST00000622535 1744 ntBASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 AC027702.1-201ENST00000563810 1770 ntBASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.47■□□□□ 0.71
ARHGEF39Q8N4T4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 AC087633.2-202ENST00000565166 1439 ntBASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.46■□□□□ 0.71
ARHGEF39Q8N4T4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 KRT18P68-201ENST00000392293 1000 ntBASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 AC133041.1-202ENST00000642053 222 ntBASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.45■□□□□ 0.7
ARHGEF39Q8N4T4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF39Q8N4T4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF39Q8N4T4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms