Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE9Q8IYJ1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.33■□□□□ 0.84
CPNE9Q8IYJ1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE9Q8IYJ1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE9Q8IYJ1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 RBM17P2-201ENST00000616397 1405 ntBASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPNE9Q8IYJ1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE9Q8IYJ1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 AC007225.1-201ENST00000566331 1836 ntBASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 MYCNOS-205ENST00000641950 531 ntBASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 LINC01006-201ENST00000333319 2292 ntBASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 FP700111.2-201ENST00000619190 1892 ntBASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE9Q8IYJ1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE9Q8IYJ1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms