Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DDX60Q8IY21 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
DDX60Q8IY21 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX60Q8IY21 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 AC008550.1-201ENST00000511500 884 ntBASIC25.6■■□□□ 1.69
DDX60Q8IY21 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX60Q8IY21 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX60Q8IY21 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 KRT17P3-201ENST00000420566 1262 ntBASIC25.6■■□□□ 1.69
DDX60Q8IY21 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.6■■□□□ 1.69
DDX60Q8IY21 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX60Q8IY21 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX60Q8IY21 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.59■■□□□ 1.69
DDX60Q8IY21 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.59■■□□□ 1.69
DDX60Q8IY21 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.59■■□□□ 1.69
DDX60Q8IY21 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX60Q8IY21 AP006294.2-201ENST00000641667 209 ntBASIC25.59■■□□□ 1.69
DDX60Q8IY21 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX60Q8IY21 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX60Q8IY21 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.59■■□□□ 1.69
DDX60Q8IY21 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX60Q8IY21 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX60Q8IY21 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
DDX60Q8IY21 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX60Q8IY21 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
DDX60Q8IY21 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX60Q8IY21 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.58■■□□□ 1.69
DDX60Q8IY21 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.58■■□□□ 1.69
DDX60Q8IY21 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
DDX60Q8IY21 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX60Q8IY21 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX60Q8IY21 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
DDX60Q8IY21 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.58■■□□□ 1.68
DDX60Q8IY21 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.58■■□□□ 1.68
DDX60Q8IY21 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX60Q8IY21 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.57■■□□□ 1.68
DDX60Q8IY21 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX60Q8IY21 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.56■■□□□ 1.68
DDX60Q8IY21 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
DDX60Q8IY21 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.56■■□□□ 1.68
DDX60Q8IY21 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
DDX60Q8IY21 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.56■■□□□ 1.68
DDX60Q8IY21 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.56■■□□□ 1.68
DDX60Q8IY21 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX60Q8IY21 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX60Q8IY21 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX60Q8IY21 UBE2SP1-201ENST00000450587 669 ntBASIC25.55■■□□□ 1.68
DDX60Q8IY21 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX60Q8IY21 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX60Q8IY21 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX60Q8IY21 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
DDX60Q8IY21 PGM5P4-201ENST00000421970 445 ntBASIC25.54■■□□□ 1.68
DDX60Q8IY21 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX60Q8IY21 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX60Q8IY21 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX60Q8IY21 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX60Q8IY21 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX60Q8IY21 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX60Q8IY21 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
DDX60Q8IY21 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms