Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 CYP21A1P-202ENST00000354927 1481 ntBASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 KRT18P68-201ENST00000392293 1000 ntBASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 TSPY20P-201ENST00000450910 630 ntBASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.73■■□□□ 1.07
SCN4BQ8IWT1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 MIR4651-201ENST00000582622 73 ntBASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 AL589743.5-201ENST00000616611 1050 ntBASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 MYC-209ENST00000641252 345 ntBASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 LINC00565-201ENST00000562710 2331 ntBASIC21.72■■□□□ 1.07
SCN4BQ8IWT1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 AL024507.2-201ENST00000606070 2574 ntBASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCN4BQ8IWT1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SCN4BQ8IWT1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SCN4BQ8IWT1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN4BQ8IWT1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms