Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE8Q86YQ8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE8Q86YQ8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CPNE8Q86YQ8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE8Q86YQ8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE8Q86YQ8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CPNE8Q86YQ8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.58■■□□□ 1.04
CPNE8Q86YQ8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
CPNE8Q86YQ8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE8Q86YQ8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE8Q86YQ8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 AL162377.1-201ENST00000618844 1793 ntBASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE8Q86YQ8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.56■■□□□ 1.04
CPNE8Q86YQ8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AC245052.3-201ENST00000450182 901 ntBASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE8Q86YQ8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPNE8Q86YQ8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE8Q86YQ8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms