Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PACS2Q86VP3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PACS2Q86VP3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
PACS2Q86VP3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 AC096631.2-201ENST00000436136 790 ntBASIC20.58■□□□□ 0.89
PACS2Q86VP3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PACS2Q86VP3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PACS2Q86VP3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.58■□□□□ 0.89
PACS2Q86VP3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.58■□□□□ 0.88
PACS2Q86VP3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PACS2Q86VP3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PACS2Q86VP3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
PACS2Q86VP3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PACS2Q86VP3 AC027702.1-201ENST00000563810 1770 ntBASIC20.57■□□□□ 0.88
PACS2Q86VP3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.57■□□□□ 0.88
PACS2Q86VP3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.57■□□□□ 0.88
PACS2Q86VP3 AL139246.5-201ENST00000606645 996 ntBASIC20.57■□□□□ 0.88
PACS2Q86VP3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS2Q86VP3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS2Q86VP3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.56■□□□□ 0.88
PACS2Q86VP3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 AC099791.2-201ENST00000605725 427 ntBASIC20.55■□□□□ 0.88
PACS2Q86VP3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 AC120498.9-201ENST00000339021 3867 ntBASIC20.55■□□□□ 0.88
PACS2Q86VP3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PACS2Q86VP3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PACS2Q86VP3 SYT6-210ENST00000641643 1587 ntBASIC20.55■□□□□ 0.88
PACS2Q86VP3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS2Q86VP3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS2Q86VP3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS2Q86VP3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS2Q86VP3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS2Q86VP3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 AL133373.2-201ENST00000623187 2828 ntBASIC20.54■□□□□ 0.88
PACS2Q86VP3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS2Q86VP3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PACS2Q86VP3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PACS2Q86VP3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.53■□□□□ 0.88
PACS2Q86VP3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PACS2Q86VP3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS2Q86VP3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms