Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 AC097381.1-201ENST00000429019 1296 ntBASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 MIR6821-201ENST00000617625 74 ntBASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF111Q6ZNA4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF111Q6ZNA4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 SMG8-203ENST00000578922 2178 ntBASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 AP006587.3-201ENST00000525742 1516 ntBASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 AC098818.2-201ENST00000564925 2320 ntBASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF111Q6ZNA4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 CCDC92B-201ENST00000575506 885 ntBASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RNF111Q6ZNA4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms