Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR3Q6P9H4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 AL390719.1-204ENST00000412397 1219 ntBASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 RARRES2P10-201ENST00000564312 460 ntBASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 AC133561.5-201ENST00000635547 218 ntBASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.3■■□□□ 1.16
CNKSR3Q6P9H4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 AC087499.1-201ENST00000418141 1075 ntBASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNKSR3Q6P9H4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 PRKY-204ENST00000533551 1019 ntBASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.28■■□□□ 1.16
CNKSR3Q6P9H4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 TSPY15P-201ENST00000457163 923 ntBASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 AL356652.1-201ENST00000615962 565 ntBASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNKSR3Q6P9H4 C1orf229-201ENST00000623686 2258 ntBASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms