Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF544Q6NX49 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 AC010141.3-201ENST00000456659 717 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L2-201ENST00000561772 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L6-201ENST00000626483 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L1-201ENST00000627662 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L8-201ENST00000629013 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L3-201ENST00000630187 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L7-201ENST00000630678 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 DUX4L5-201ENST00000630834 1275 ntBASIC18.79■□□□□ 0.6
ZNF544Q6NX49 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF544Q6NX49 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 OXCT2P1-201ENST00000447263 1535 ntBASIC18.78■□□□□ 0.6
ZNF544Q6NX49 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
ZNF544Q6NX49 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 FEM1AP4-201ENST00000443167 1987 ntBASIC18.77■□□□□ 0.6
ZNF544Q6NX49 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 CCDC92B-201ENST00000575506 885 ntBASIC18.77■□□□□ 0.6
ZNF544Q6NX49 TERF1P2-201ENST00000583350 1212 ntBASIC18.77■□□□□ 0.6
ZNF544Q6NX49 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF544Q6NX49 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF544Q6NX49 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF544Q6NX49 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 KRT18P5-201ENST00000436075 1291 ntBASIC18.76■□□□□ 0.59
ZNF544Q6NX49 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF544Q6NX49 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms