Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC005181.1-201ENST00000604782 1256 ntBASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC116050.2-201ENST00000612102 1779 ntBASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 AF106564.1-201ENST00000607058 2553 ntBASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC007322.3-201ENST00000426526 701 ntBASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC006970.2-201ENST00000450065 779 ntBASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC069236.1-201ENST00000604339 616 ntBASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DQA1Q5Y7H0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 AL162412.1-201ENST00000567129 965 ntBASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC068338.2-201ENST00000563278 1430 ntBASIC19.16■□□□□ 0.66
HLA-DQA1Q5Y7H0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 MIR663A-201ENST00000385250 93 ntBASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC007375.3-201ENST00000600936 2314 ntBASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HLA-DQA1Q5Y7H0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.14■□□□□ 0.66
HLA-DQA1Q5Y7H0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
HLA-DQA1Q5Y7H0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC121338.2-201ENST00000622535 1744 ntBASIC19.14■□□□□ 0.66
HLA-DQA1Q5Y7H0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DQA1Q5Y7H0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQA1Q5Y7H0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 CYP2T1P-201ENST00000432607 1285 ntBASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 AC090192.1-201ENST00000517740 490 ntBASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms