Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARFGEF3Q5TH69 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARFGEF3Q5TH69 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
ARFGEF3Q5TH69 LSM12P1-201ENST00000411836 588 ntBASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 AC105020.6-201ENST00000621523 1217 ntBASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 AC142381.4-202ENST00000563973 229 ntBASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 AL356652.1-201ENST00000615962 565 ntBASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.5■□□□□ 0.39
ARFGEF3Q5TH69 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 AC060766.5-201ENST00000590539 871 ntBASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 FBXW4P1-201ENST00000426721 2239 ntBASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.49■□□□□ 0.39
ARFGEF3Q5TH69 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 AC008403.3-201ENST00000598924 454 ntBASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 Z98882.1-201ENST00000622160 2253 ntBASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.48■□□□□ 0.39
ARFGEF3Q5TH69 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 RPS2P52-201ENST00000469610 820 ntBASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 AC026366.1-201ENST00000488803 879 ntBASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 KRT18P68-201ENST00000392293 1000 ntBASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARFGEF3Q5TH69 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms