Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.69■□□□□ 0.9
LGSNQ5TDP6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LGSNQ5TDP6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGSNQ5TDP6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LGSNQ5TDP6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LGSNQ5TDP6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 AC008764.7-201ENST00000593779 1081 ntBASIC20.68■□□□□ 0.9
LGSNQ5TDP6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 AC135279.3-201ENST00000610945 1311 ntBASIC20.68■□□□□ 0.9
LGSNQ5TDP6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 AL512408.1-201ENST00000569378 2000 ntBASIC20.68■□□□□ 0.9
LGSNQ5TDP6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGSNQ5TDP6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.67■□□□□ 0.9
LGSNQ5TDP6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 EEF1DP3-203ENST00000566025 782 ntBASIC20.67■□□□□ 0.9
LGSNQ5TDP6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LGSNQ5TDP6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.66■□□□□ 0.9
LGSNQ5TDP6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 TSPY26P-201ENST00000476365 1326 ntBASIC20.66■□□□□ 0.9
LGSNQ5TDP6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGSNQ5TDP6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
LGSNQ5TDP6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LGSNQ5TDP6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.64■□□□□ 0.9
LGSNQ5TDP6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LGSNQ5TDP6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.64■□□□□ 0.9
LGSNQ5TDP6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LGSNQ5TDP6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGSNQ5TDP6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LGSNQ5TDP6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms