Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NCBP3Q53F19 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.95■■□□□ 1.91
NCBP3Q53F19 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
NCBP3Q53F19 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.95■■□□□ 1.9
NCBP3Q53F19 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NCBP3Q53F19 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NCBP3Q53F19 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.95■■□□□ 1.9
NCBP3Q53F19 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.95■■□□□ 1.9
NCBP3Q53F19 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
NCBP3Q53F19 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.95■■□□□ 1.9
NCBP3Q53F19 AC133552.2-202ENST00000575694 574 ntBASIC26.95■■□□□ 1.9
NCBP3Q53F19 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
NCBP3Q53F19 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
NCBP3Q53F19 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 AC004911.1-201ENST00000416316 871 ntBASIC26.94■■□□□ 1.9
NCBP3Q53F19 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 MIR3908-201ENST00000579798 126 ntBASIC26.94■■□□□ 1.9
NCBP3Q53F19 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 AC007225.1-201ENST00000566331 1836 ntBASIC26.94■■□□□ 1.9
NCBP3Q53F19 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.94■■□□□ 1.9
NCBP3Q53F19 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NCBP3Q53F19 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.93■■□□□ 1.9
NCBP3Q53F19 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
NCBP3Q53F19 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.92■■□□□ 1.9
NCBP3Q53F19 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
NCBP3Q53F19 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.92■■□□□ 1.9
NCBP3Q53F19 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NCBP3Q53F19 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.92■■□□□ 1.9
NCBP3Q53F19 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NCBP3Q53F19 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
NCBP3Q53F19 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.91■■□□□ 1.9
NCBP3Q53F19 CYP2T1P-201ENST00000432607 1285 ntBASIC26.91■■□□□ 1.9
NCBP3Q53F19 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.91■■□□□ 1.9
NCBP3Q53F19 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.91■■□□□ 1.9
NCBP3Q53F19 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.9■■□□□ 1.9
NCBP3Q53F19 KRT8P36-201ENST00000489121 1440 ntBASIC26.9■■□□□ 1.9
NCBP3Q53F19 AC087633.2-202ENST00000565166 1439 ntBASIC26.9■■□□□ 1.9
NCBP3Q53F19 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NCBP3Q53F19 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NCBP3Q53F19 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NCBP3Q53F19 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NCBP3Q53F19 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NCBP3Q53F19 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.9■■□□□ 1.9
NCBP3Q53F19 CYP21A1P-202ENST00000354927 1481 ntBASIC26.9■■□□□ 1.9
NCBP3Q53F19 AC026185.1-201ENST00000445748 174 ntBASIC26.9■■□□□ 1.9
NCBP3Q53F19 AC091917.2-201ENST00000505002 744 ntBASIC26.9■■□□□ 1.9
NCBP3Q53F19 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NCBP3Q53F19 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
NCBP3Q53F19 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
NCBP3Q53F19 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.9■■□□□ 1.9
NCBP3Q53F19 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NCBP3Q53F19 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NCBP3Q53F19 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NCBP3Q53F19 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC26.89■■□□□ 1.9
NCBP3Q53F19 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NCBP3Q53F19 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
NCBP3Q53F19 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NCBP3Q53F19 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.89■■□□□ 1.89
NCBP3Q53F19 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.88■■□□□ 1.89
NCBP3Q53F19 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
NCBP3Q53F19 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NCBP3Q53F19 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.88■■□□□ 1.89
NCBP3Q53F19 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms