Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 AC011484.1-201ENST00000377652 1995 ntBASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCHD3Q3KNS1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 AC104771.1-201ENST00000603335 964 ntBASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCHD3Q3KNS1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.08■□□□□ 0.81
PTCHD3Q3KNS1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.08■□□□□ 0.8
PTCHD3Q3KNS1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 AC007322.1-201ENST00000426983 750 ntBASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 AL109923.1-201ENST00000618799 583 ntBASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCHD3Q3KNS1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 NCF1B-203ENST00000435988 1254 ntBASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 AL157384.1-201ENST00000445995 2473 ntBASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 RBM17P2-201ENST00000616397 1405 ntBASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 AL050303.2-201ENST00000619798 666 ntBASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 AC231657.2-201ENST00000624556 255 ntBASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTCHD3Q3KNS1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTCHD3Q3KNS1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCHD3Q3KNS1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms