Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP9P55211 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
CASP9P55211 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.38■□□□□ 0.69
CASP9P55211 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.38■□□□□ 0.69
CASP9P55211 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASP9P55211 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP9P55211 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.38■□□□□ 0.69
CASP9P55211 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASP9P55211 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CASP9P55211 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.38■□□□□ 0.69
CASP9P55211 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASP9P55211 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CASP9P55211 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CASP9P55211 LINC02228-203ENST00000641970 1355 ntBASIC19.37■□□□□ 0.69
CASP9P55211 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CASP9P55211 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 AC104187.1-201ENST00000607510 612 ntBASIC19.37■□□□□ 0.69
CASP9P55211 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.37■□□□□ 0.69
CASP9P55211 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.37■□□□□ 0.69
CASP9P55211 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.37■□□□□ 0.69
CASP9P55211 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASP9P55211 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
CASP9P55211 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CASP9P55211 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 ZNRF2P3-201ENST00000424200 374 ntBASIC19.36■□□□□ 0.69
CASP9P55211 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.36■□□□□ 0.69
CASP9P55211 SLC7A5P2-201ENST00000553010 536 ntBASIC19.36■□□□□ 0.69
CASP9P55211 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.36■□□□□ 0.69
CASP9P55211 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP9P55211 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP9P55211 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CASP9P55211 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 AC011484.1-201ENST00000377652 1995 ntBASIC19.35■□□□□ 0.69
CASP9P55211 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CASP9P55211 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP9P55211 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CASP9P55211 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CASP9P55211 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP9P55211 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CASP9P55211 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.35■□□□□ 0.69
CASP9P55211 AC138907.5-202ENST00000569484 235 ntBASIC19.35■□□□□ 0.69
CASP9P55211 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP9P55211 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
CASP9P55211 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP9P55211 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP9P55211 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 AL121603.2-201ENST00000557373 2117 ntBASIC19.34■□□□□ 0.69
CASP9P55211 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CASP9P55211 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP9P55211 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP9P55211 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP9P55211 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CASP9P55211 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP9P55211 AC020907.5-201ENST00000624372 1936 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms