Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATXN1P54253 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATXN1P54253 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.6■■□□□ 1.05
ATXN1P54253 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.59■■□□□ 1.05
ATXN1P54253 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.59■■□□□ 1.05
ATXN1P54253 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 AC091799.1-201ENST00000422823 811 ntBASIC21.59■■□□□ 1.05
ATXN1P54253 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.59■■□□□ 1.05
ATXN1P54253 TERF1P5-201ENST00000477545 1207 ntBASIC21.59■■□□□ 1.05
ATXN1P54253 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ATXN1P54253 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATXN1P54253 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.58■■□□□ 1.05
ATXN1P54253 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ATXN1P54253 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.58■■□□□ 1.05
ATXN1P54253 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.58■■□□□ 1.05
ATXN1P54253 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 AC098590.1-201ENST00000468126 897 ntBASIC21.58■■□□□ 1.05
ATXN1P54253 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATXN1P54253 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ATXN1P54253 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
ATXN1P54253 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ATXN1P54253 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.58■■□□□ 1.04
ATXN1P54253 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
ATXN1P54253 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATXN1P54253 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN1P54253 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN1P54253 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ATXN1P54253 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN1P54253 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
ATXN1P54253 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN1P54253 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN1P54253 DUSP5P2-201ENST00000426873 1033 ntBASIC21.57■■□□□ 1.04
ATXN1P54253 CNN2P6-201ENST00000439038 900 ntBASIC21.57■■□□□ 1.04
ATXN1P54253 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.57■■□□□ 1.04
ATXN1P54253 RNA5SP413-201ENST00000516373 109 ntBASIC21.57■■□□□ 1.04
ATXN1P54253 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.57■■□□□ 1.04
ATXN1P54253 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
ATXN1P54253 AC243732.1-201ENST00000612648 864 ntBASIC21.57■■□□□ 1.04
ATXN1P54253 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATXN1P54253 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN1P54253 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATXN1P54253 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.56■■□□□ 1.04
ATXN1P54253 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.56■■□□□ 1.04
ATXN1P54253 AC098934.4-201ENST00000564127 592 ntBASIC21.56■■□□□ 1.04
ATXN1P54253 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.56■■□□□ 1.04
ATXN1P54253 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN1P54253 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.56■■□□□ 1.04
ATXN1P54253 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.56■■□□□ 1.04
ATXN1P54253 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.56■■□□□ 1.04
ATXN1P54253 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN1P54253 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATXN1P54253 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
ATXN1P54253 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 AC121338.2-201ENST00000622535 1744 ntBASIC21.55■■□□□ 1.04
ATXN1P54253 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.55■■□□□ 1.04
ATXN1P54253 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.55■■□□□ 1.04
ATXN1P54253 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.55■■□□□ 1.04
ATXN1P54253 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
ATXN1P54253 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ATXN1P54253 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.55■■□□□ 1.04
ATXN1P54253 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN1P54253 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN1P54253 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ATXN1P54253 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
ATXN1P54253 RPS2P4-201ENST00000476944 856 ntBASIC21.54■■□□□ 1.04
ATXN1P54253 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN1P54253 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.54■■□□□ 1.04
ATXN1P54253 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN1P54253 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN1P54253 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
ATXN1P54253 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN1P54253 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ATXN1P54253 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.53■■□□□ 1.04
ATXN1P54253 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 MIR1224-201ENST00000408193 85 ntBASIC21.53■■□□□ 1.04
ATXN1P54253 GCSHP5-201ENST00000443090 522 ntBASIC21.53■■□□□ 1.04
ATXN1P54253 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.53■■□□□ 1.04
ATXN1P54253 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN1P54253 AF201337.1-201ENST00000520239 748 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms