Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 IRC8YJL051W 2469 nt1.92□□□□□ -2.1
SSU72P53538 KAP123YER110C 3342 nt1.92□□□□□ -2.1
SSU72P53538 YEA4YEL004W 1029 nt1.92□□□□□ -2.1
SSU72P53538 NTF2YER009W 378 nt1.92□□□□□ -2.1
SSU72P53538 TMN3YER113C 2121 nt1.92□□□□□ -2.1
SSU72P53538 ACB1YGR037C 264 nt1.92□□□□□ -2.1
SSU72P53538 YHR050W-AYHR050W-A 171 nt1.92□□□□□ -2.1
SSU72P53538 EST3YIL009C-A 546 nt1.92□□□□□ -2.1
SSU72P53538 YIL012WYIL012W 342 nt1.92□□□□□ -2.1
SSU72P53538 YAL016C-BYAL016C-B 186 nt1.92□□□□□ -2.1
SSU72P53538 YAP7YOL028C 738 nt1.92□□□□□ -2.1
SSU72P53538 REV1YOR346W 2958 nt1.92□□□□□ -2.1
SSU72P53538 YCL002CYCL002C 792 nt1.92□□□□□ -2.1
SSU72P53538 ADF1YCL058W-A 342 nt1.92□□□□□ -2.1
SSU72P53538 YKL075CYKL075C 1353 nt1.92□□□□□ -2.1
SSU72P53538 IPT1YDR072C 1584 nt1.92□□□□□ -2.1
SSU72P53538 PUF4YGL014W 2667 nt1.92□□□□□ -2.1
SSU72P53538 BUD2YKL092C 3315 nt1.91□□□□□ -2.1
SSU72P53538 YIP1YGR172C 747 nt1.91□□□□□ -2.1
SSU72P53538 YET1YKL065C 621 nt1.91□□□□□ -2.1
SSU72P53538 RCN1YKL159C 636 nt1.91□□□□□ -2.1
SSU72P53538 SDS22YKL193C 1017 nt1.91□□□□□ -2.1
SSU72P53538 HEM4YOR278W 828 nt1.91□□□□□ -2.1
SSU72P53538 YBR062CYBR062C 543 nt1.91□□□□□ -2.1
SSU72P53538 YBR063CYBR063C 1215 nt1.91□□□□□ -2.1
SSU72P53538 snR191snR191 274 nt1.91□□□□□ -2.1
SSU72P53538 PDR8YLR266C 2106 nt1.91□□□□□ -2.1
SSU72P53538 MSB1YOR188W 3414 nt1.91□□□□□ -2.1
SSU72P53538 TOR2YKL203C 7425 nt1.9□□□□□ -2.1
SSU72P53538 PUT3YKL015W 2940 nt1.9□□□□□ -2.11
SSU72P53538 YDL158CYDL158C 309 nt1.9□□□□□ -2.11
SSU72P53538 YER091C-AYER091C-A 222 nt1.9□□□□□ -2.11
SSU72P53538 YMR31YFR049W 372 nt1.9□□□□□ -2.11
SSU72P53538 AYR1YIL124W 894 nt1.9□□□□□ -2.11
SSU72P53538 ASG7YJL170C 630 nt1.9□□□□□ -2.11
SSU72P53538 YAL037WYAL037W 804 nt1.9□□□□□ -2.11
SSU72P53538 VPS63YLR261C 327 nt1.9□□□□□ -2.11
SSU72P53538 IRC21YMR073C 606 nt1.9□□□□□ -2.11
SSU72P53538 RRT16YNL105W 429 nt1.9□□□□□ -2.11
SSU72P53538 ESF2YNR054C 951 nt1.9□□□□□ -2.11
SSU72P53538 YOL107WYOL107W 1029 nt1.9□□□□□ -2.11
SSU72P53538 YEL1YBL060W 2064 nt1.9□□□□□ -2.11
SSU72P53538 SPP41YDR464W 4308 nt1.9□□□□□ -2.11
SSU72P53538 YFL002W-BYFL002W-B 1317 nt1.9□□□□□ -2.11
SSU72P53538 YGR161W-AYGR161W-A 1317 nt1.9□□□□□ -2.11
SSU72P53538 YBL100W-AYBL100W-A 1317 nt1.9□□□□□ -2.11
SSU72P53538 YCL020WYCL020W 1317 nt1.9□□□□□ -2.11
SSU72P53538 SHS1YDL225W 1656 nt1.9□□□□□ -2.11
SSU72P53538 APM3YBR288C 1452 nt1.89□□□□□ -2.11
SSU72P53538 VAC8YEL013W 1737 nt1.89□□□□□ -2.11
SSU72P53538 DFG16YOR030W 1860 nt1.89□□□□□ -2.11
SSU72P53538 YCR081C-AYCR081C-A 237 nt1.89□□□□□ -2.11
SSU72P53538 PBP4YDL053C 558 nt1.89□□□□□ -2.11
SSU72P53538 MRP49YKL167C 414 nt1.89□□□□□ -2.11
SSU72P53538 RPS16AYMR143W 432 nt1.89□□□□□ -2.11
SSU72P53538 YBR051WYBR051W 351 nt1.89□□□□□ -2.11
SSU72P53538 YPR014CYPR014C 330 nt1.89□□□□□ -2.11
SSU72P53538 SSP1YHR184W 1716 nt1.88□□□□□ -2.11
SSU72P53538 PSK2YOL045W 3306 nt1.88□□□□□ -2.11
SSU72P53538 ESC2YDR363W 1371 nt1.88□□□□□ -2.11
SSU72P53538 YCR090CYCR090C 549 nt1.88□□□□□ -2.11
SSU72P53538 RSM18YER050C 417 nt1.88□□□□□ -2.11
SSU72P53538 GET1YGL020C 708 nt1.88□□□□□ -2.11
SSU72P53538 YGR053CYGR053C 852 nt1.88□□□□□ -2.11
SSU72P53538 YJL147CYJL147C 1149 nt1.88□□□□□ -2.11
SSU72P53538 YCL007CYCL007C 393 nt1.88□□□□□ -2.11
SSU72P53538 MPH1YIR002C 2982 nt1.88□□□□□ -2.11
SSU72P53538 VPS8YAL002W 3825 nt1.87□□□□□ -2.11
SSU72P53538 RLF2YPR018W 1821 nt1.87□□□□□ -2.11
SSU72P53538 YCR099CYCR099C 468 nt1.87□□□□□ -2.11
SSU72P53538 YEL050W-AYEL050W-A 192 nt1.87□□□□□ -2.11
SSU72P53538 VPS51YKR020W 495 nt1.87□□□□□ -2.11
SSU72P53538 YLR446WYLR446W 1302 nt1.87□□□□□ -2.11
SSU72P53538 NOP14YDL148C 2433 nt1.87□□□□□ -2.11
SSU72P53538 COG3YER157W 2406 nt1.87□□□□□ -2.11
SSU72P53538 TAE2YPL009C 3117 nt1.86□□□□□ -2.11
SSU72P53538 DAD1YDR016C 285 nt1.86□□□□□ -2.11
SSU72P53538 MND1YGL183C 660 nt1.86□□□□□ -2.11
SSU72P53538 YGR226CYGR226C 210 nt1.86□□□□□ -2.11
SSU72P53538 AIM19YIL087C 474 nt1.86□□□□□ -2.11
SSU72P53538 YIR020C-BYIR020C-B 735 nt1.86□□□□□ -2.11
SSU72P53538 RLP24YLR009W 600 nt1.86□□□□□ -2.11
SSU72P53538 TMA7YLR262C-A 195 nt1.86□□□□□ -2.11
SSU72P53538 COX8YLR395C 237 nt1.86□□□□□ -2.11
SSU72P53538 VTI1YMR197C 654 nt1.86□□□□□ -2.11
SSU72P53538 SGT1YOR057W 1188 nt1.86□□□□□ -2.11
SSU72P53538 ARL3YPL051W 597 nt1.86□□□□□ -2.11
SSU72P53538 snR43snR43 209 nt1.86□□□□□ -2.11
SSU72P53538 RUD3YOR216C 1455 nt1.86□□□□□ -2.11
SSU72P53538 RNH70YGR276C 1662 nt1.86□□□□□ -2.11
SSU72P53538 BAS1YKR099W 2436 nt1.86□□□□□ -2.11
SSU72P53538 GDI1YER136W 1356 nt1.85□□□□□ -2.11
SSU72P53538 UBR2YLR024C 5619 nt1.85□□□□□ -2.11
SSU72P53538 15S_rRNA15S_rRNA 1649 nt1.85□□□□□ -2.11
SSU72P53538 YER189WYER189W 369 nt1.85□□□□□ -2.11
SSU72P53538 YFR009W-AYFR009W-A 258 nt1.85□□□□□ -2.11
SSU72P53538 YIL058WYIL058W 285 nt1.85□□□□□ -2.11
SSU72P53538 SFM1YOR021C 642 nt1.85□□□□□ -2.11
SSU72P53538 GIS1YDR096W 2685 nt1.85□□□□□ -2.11
SSU72P53538 BUB1YGR188C 3066 nt1.85□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms