Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CLCN4P51793 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN4P51793 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN4P51793 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN4P51793 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN4P51793 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLCN4P51793 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CLCN4P51793 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CLCN4P51793 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.74■■□□□ 1.07
CLCN4P51793 C2orf69P4-201ENST00000565394 541 ntBASIC21.74■■□□□ 1.07
CLCN4P51793 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CLCN4P51793 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN4P51793 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLCN4P51793 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN4P51793 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN4P51793 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CLCN4P51793 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN4P51793 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.74■■□□□ 1.07
CLCN4P51793 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.74■■□□□ 1.07
CLCN4P51793 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CLCN4P51793 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.73■■□□□ 1.07
CLCN4P51793 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN4P51793 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLCN4P51793 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.73■■□□□ 1.07
CLCN4P51793 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
CLCN4P51793 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.73■■□□□ 1.07
CLCN4P51793 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN4P51793 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN4P51793 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CLCN4P51793 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLCN4P51793 SNORA78-201ENST00000459373 127 ntBASIC21.72■■□□□ 1.07
CLCN4P51793 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLCN4P51793 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN4P51793 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
CLCN4P51793 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
CLCN4P51793 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN4P51793 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLCN4P51793 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN4P51793 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN4P51793 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CLCN4P51793 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLCN4P51793 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN4P51793 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN4P51793 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.7■■□□□ 1.07
CLCN4P51793 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.7■■□□□ 1.07
CLCN4P51793 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CLCN4P51793 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.7■■□□□ 1.06
CLCN4P51793 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN4P51793 AC073912.3-201ENST00000624414 853 ntBASIC21.7■■□□□ 1.06
CLCN4P51793 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CLCN4P51793 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.7■■□□□ 1.06
CLCN4P51793 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLCN4P51793 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 AC087633.2-202ENST00000565166 1439 ntBASIC21.7■■□□□ 1.06
CLCN4P51793 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN4P51793 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN4P51793 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCN4P51793 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN4P51793 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN4P51793 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN4P51793 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN4P51793 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN4P51793 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CLCN4P51793 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms