Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.31■■□□□ 1.32
USP11P51784 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.31■■□□□ 1.32
USP11P51784 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.3■■□□□ 1.32
USP11P51784 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.3■■□□□ 1.32
USP11P51784 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.3■■□□□ 1.32
USP11P51784 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.3■■□□□ 1.32
USP11P51784 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.3■■□□□ 1.32
USP11P51784 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
USP11P51784 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.3■■□□□ 1.32
USP11P51784 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
USP11P51784 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.3■■□□□ 1.32
USP11P51784 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP11P51784 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.3■■□□□ 1.32
USP11P51784 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
USP11P51784 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
USP11P51784 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP11P51784 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.29■■□□□ 1.32
USP11P51784 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP11P51784 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP11P51784 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.29■■□□□ 1.32
USP11P51784 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP11P51784 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.29■■□□□ 1.32
USP11P51784 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.29■■□□□ 1.32
USP11P51784 KRT18P68-201ENST00000392293 1000 ntBASIC23.29■■□□□ 1.32
USP11P51784 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.29■■□□□ 1.32
USP11P51784 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.29■■□□□ 1.32
USP11P51784 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.29■■□□□ 1.32
USP11P51784 AC142086.2-201ENST00000569753 217 ntBASIC23.29■■□□□ 1.32
USP11P51784 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.29■■□□□ 1.32
USP11P51784 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.29■■□□□ 1.32
USP11P51784 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
USP11P51784 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP11P51784 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.29■■□□□ 1.32
USP11P51784 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.29■■□□□ 1.32
USP11P51784 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
USP11P51784 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.28■■□□□ 1.32
USP11P51784 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
USP11P51784 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
USP11P51784 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.28■■□□□ 1.32
USP11P51784 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.28■■□□□ 1.32
USP11P51784 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.28■■□□□ 1.32
USP11P51784 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.28■■□□□ 1.32
USP11P51784 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.28■■□□□ 1.32
USP11P51784 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.28■■□□□ 1.32
USP11P51784 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 AC006128.1-201ENST00000624704 1661 ntBASIC23.28■■□□□ 1.32
USP11P51784 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
USP11P51784 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP11P51784 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
USP11P51784 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
USP11P51784 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 AC087633.2-202ENST00000565166 1439 ntBASIC23.27■■□□□ 1.32
USP11P51784 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
USP11P51784 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
USP11P51784 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.27■■□□□ 1.32
USP11P51784 BX276092.2-201ENST00000417668 665 ntBASIC23.27■■□□□ 1.32
USP11P51784 AL355472.2-201ENST00000422958 438 ntBASIC23.27■■□□□ 1.32
USP11P51784 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.27■■□□□ 1.32
USP11P51784 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.27■■□□□ 1.32
USP11P51784 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.27■■□□□ 1.32
USP11P51784 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP11P51784 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.27■■□□□ 1.32
USP11P51784 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP11P51784 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.26■■□□□ 1.31
USP11P51784 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.26■■□□□ 1.31
USP11P51784 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.26■■□□□ 1.31
USP11P51784 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
USP11P51784 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
USP11P51784 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP11P51784 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP11P51784 AL137060.1-201ENST00000618151 2648 ntBASIC23.26■■□□□ 1.31
USP11P51784 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.26■■□□□ 1.31
USP11P51784 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
USP11P51784 PGM5P4-201ENST00000421970 445 ntBASIC23.26■■□□□ 1.31
USP11P51784 AC073210.2-201ENST00000430369 194 ntBASIC23.26■■□□□ 1.31
USP11P51784 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms