Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RARRES2P11-201ENST00000635158 484 ntBASIC19.08■□□□□ 0.64
RNF144AP50876 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF144AP50876 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF144AP50876 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF144AP50876 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF144AP50876 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF144AP50876 AC006128.1-201ENST00000624704 1661 ntBASIC19.08■□□□□ 0.64
RNF144AP50876 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF144AP50876 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RNF144AP50876 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF144AP50876 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF144AP50876 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF144AP50876 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 KRT19P1-201ENST00000405746 1186 ntBASIC19.07■□□□□ 0.64
RNF144AP50876 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF144AP50876 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF144AP50876 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF144AP50876 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF144AP50876 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RNF144AP50876 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.07■□□□□ 0.64
RNF144AP50876 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF144AP50876 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF144AP50876 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF144AP50876 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF144AP50876 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF144AP50876 LINC01006-201ENST00000333319 2292 ntBASIC19.06■□□□□ 0.64
RNF144AP50876 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF144AP50876 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF144AP50876 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF144AP50876 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF144AP50876 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF144AP50876 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF144AP50876 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF144AP50876 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF144AP50876 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RNF144AP50876 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RNF144AP50876 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF144AP50876 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF144AP50876 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RNF144AP50876 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF144AP50876 AC137761.2-201ENST00000561729 223 ntBASIC19.05■□□□□ 0.64
RNF144AP50876 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF144AP50876 AC145350.3-201ENST00000569033 163 ntBASIC19.05■□□□□ 0.64
RNF144AP50876 AL391422.3-201ENST00000603791 2761 ntBASIC19.05■□□□□ 0.64
RNF144AP50876 KRT16P2-201ENST00000414673 1423 ntBASIC19.05■□□□□ 0.64
RNF144AP50876 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF144AP50876 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF144AP50876 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF144AP50876 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF144AP50876 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF144AP50876 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RNF144AP50876 PCDHAC2-203ENST00000615316 3011 ntBASIC19.04■□□□□ 0.64
RNF144AP50876 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF144AP50876 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF144AP50876 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RNF144AP50876 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF144AP50876 AC245052.3-201ENST00000450182 901 ntBASIC19.04■□□□□ 0.64
RNF144AP50876 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF144AP50876 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms