Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 SKI3YPR189W 4299 nt1.03□□□□□ -2.24
VPS55P47111 DSE1YER124C 1722 nt1.03□□□□□ -2.24
VPS55P47111 LAA1YJL207C 6045 nt1.03□□□□□ -2.24
VPS55P47111 YOR019WYOR019W 2193 nt1.03□□□□□ -2.24
VPS55P47111 COG3YER157W 2406 nt1.03□□□□□ -2.24
VPS55P47111 YGR130CYGR130C 2451 nt1.03□□□□□ -2.24
VPS55P47111 GLC7YER133W 939 nt1.03□□□□□ -2.24
VPS55P47111 RPS25AYGR027C 327 nt1.03□□□□□ -2.24
VPS55P47111 YIL020C-AYIL020C-A 339 nt1.03□□□□□ -2.24
VPS55P47111 YIL046W-AYIL046W-A 165 nt1.03□□□□□ -2.24
VPS55P47111 SHE2YKL130C 741 nt1.03□□□□□ -2.24
VPS55P47111 SRN2YLR119W 642 nt1.03□□□□□ -2.24
VPS55P47111 RPB11YOL005C 363 nt1.03□□□□□ -2.24
VPS55P47111 YOL159CYOL159C 516 nt1.03□□□□□ -2.24
VPS55P47111 YPL238CYPL238C 390 nt1.03□□□□□ -2.24
VPS55P47111 YJL070CYJL070C 2667 nt1.03□□□□□ -2.24
VPS55P47111 POL5YEL055C 3069 nt1.03□□□□□ -2.24
VPS55P47111 JJJ2YJL162C 1752 nt1.03□□□□□ -2.24
VPS55P47111 RVS161YCR009C 798 nt1.02□□□□□ -2.25
VPS55P47111 RPL31AYDL075W 342 nt1.02□□□□□ -2.25
VPS55P47111 CDC36YDL165W 576 nt1.02□□□□□ -2.25
VPS55P47111 KCS1YDR017C 3153 nt1.02□□□□□ -2.25
VPS55P47111 PET100YDR079W 336 nt1.02□□□□□ -2.25
VPS55P47111 YER189WYER189W 369 nt1.02□□□□□ -2.25
VPS55P47111 YBL096CYBL096C 309 nt1.02□□□□□ -2.25
VPS55P47111 SPC29YPL124W 762 nt1.02□□□□□ -2.25
VPS55P47111 snR35snR35 204 nt1.02□□□□□ -2.25
VPS55P47111 SXM1YDR395W 2835 nt1.02□□□□□ -2.25
VPS55P47111 SEC21YNL287W 2808 nt1.02□□□□□ -2.25
VPS55P47111 MAD1YGL086W 2250 nt1.01□□□□□ -2.25
VPS55P47111 YEA4YEL004W 1029 nt1.01□□□□□ -2.25
VPS55P47111 MMS2YGL087C 414 nt1.01□□□□□ -2.25
VPS55P47111 MRP49YKL167C 414 nt1.01□□□□□ -2.25
VPS55P47111 MSA2YKR077W 1092 nt1.01□□□□□ -2.25
VPS55P47111 ARC18YLR370C 537 nt1.01□□□□□ -2.25
VPS55P47111 SPO24YPR036W-A 204 nt1.01□□□□□ -2.25
VPS55P47111 PRK1YIL095W 2433 nt1.01□□□□□ -2.25
VPS55P47111 CTF18YMR078C 2226 nt1.01□□□□□ -2.25
VPS55P47111 NAM7YMR080C 2916 nt1□□□□□ -2.25
VPS55P47111 PBP4YDL053C 558 nt1□□□□□ -2.25
VPS55P47111 CRD1YDL142C 852 nt1□□□□□ -2.25
VPS55P47111 FMP16YDR070C 282 nt1□□□□□ -2.25
VPS55P47111 DIG2YDR480W 972 nt1□□□□□ -2.25
VPS55P47111 HHT2YNL031C 411 nt1□□□□□ -2.25
VPS55P47111 ESC2YDR363W 1371 nt0.99□□□□□ -2.25
VPS55P47111 YNL284C-AYNL284C-A 1323 nt0.99□□□□□ -2.25
VPS55P47111 YBR012W-AYBR012W-A 1323 nt0.99□□□□□ -2.25
VPS55P47111 YOR142W-AYOR142W-A 1323 nt0.99□□□□□ -2.25
VPS55P47111 YPR158W-AYPR158W-A 1323 nt0.99□□□□□ -2.25
VPS55P47111 YGL242CYGL242C 546 nt0.99□□□□□ -2.25
VPS55P47111 EST3YIL009C-A 546 nt0.99□□□□□ -2.25
VPS55P47111 TRX1YLR043C 312 nt0.99□□□□□ -2.25
VPS55P47111 YLR053CYLR053C 327 nt0.99□□□□□ -2.25
VPS55P47111 RPL6BYLR448W 531 nt0.99□□□□□ -2.25
VPS55P47111 MCT1YOR221C 1083 nt0.99□□□□□ -2.25
VPS55P47111 BUD3YCL014W 4911 nt0.99□□□□□ -2.25
VPS55P47111 SYH1YPL105C 2550 nt0.99□□□□□ -2.25
VPS55P47111 YDR341CYDR341C 1824 nt0.99□□□□□ -2.25
VPS55P47111 PET309YLR067C 2898 nt0.98□□□□□ -2.25
VPS55P47111 TBS1YBR150C 3285 nt0.98□□□□□ -2.25
VPS55P47111 YEL009C-AYEL009C-A 408 nt0.98□□□□□ -2.25
VPS55P47111 YML003WYML003W 873 nt0.98□□□□□ -2.25
VPS55P47111 PKR1YMR123W 369 nt0.98□□□□□ -2.25
VPS55P47111 YOR333CYOR333C 417 nt0.98□□□□□ -2.25
VPS55P47111 IML1YJR138W 4755 nt0.98□□□□□ -2.25
VPS55P47111 BAS1YKR099W 2436 nt0.98□□□□□ -2.25
VPS55P47111 SRD1YCR018C 666 nt0.97□□□□□ -2.25
VPS55P47111 YCR087C-AYCR087C-A 462 nt0.97□□□□□ -2.25
VPS55P47111 TDA10YGR205W 873 nt0.97□□□□□ -2.25
VPS55P47111 YGR283CYGR283C 1026 nt0.97□□□□□ -2.25
VPS55P47111 tV(UAC)BtV(UAC)B 74 nt0.97□□□□□ -2.25
VPS55P47111 tV(UAC)DtV(UAC)D 74 nt0.97□□□□□ -2.25
VPS55P47111 YLR225CYLR225C 1224 nt0.97□□□□□ -2.25
VPS55P47111 YMR099CYMR099C 894 nt0.97□□□□□ -2.25
VPS55P47111 YOR114WYOR114W 885 nt0.97□□□□□ -2.25
VPS55P47111 IAH1YOR126C 717 nt0.97□□□□□ -2.25
VPS55P47111 TOA1YOR194C 861 nt0.97□□□□□ -2.25
VPS55P47111 RPL33BYOR234C 324 nt0.97□□□□□ -2.25
VPS55P47111 MNE1YOR350C 1992 nt0.97□□□□□ -2.25
VPS55P47111 LEU3YLR451W 2661 nt0.97□□□□□ -2.25
VPS55P47111 SPO75YLL005C 2607 nt0.97□□□□□ -2.25
VPS55P47111 MMS22YLR320W 4365 nt0.96□□□□□ -2.26
VPS55P47111 RAD9YDR217C 3930 nt0.96□□□□□ -2.26
VPS55P47111 CDC37YDR168W 1521 nt0.96□□□□□ -2.26
VPS55P47111 snR68snR68 136 nt0.96□□□□□ -2.26
VPS55P47111 YHR212CYHR212C 336 nt0.96□□□□□ -2.26
VPS55P47111 ATG38YLR211C 681 nt0.96□□□□□ -2.26
VPS55P47111 YAR060CYAR060C 336 nt0.96□□□□□ -2.26
VPS55P47111 YML047W-AYML047W-A 366 nt0.96□□□□□ -2.26
VPS55P47111 YMR052C-AYMR052C-A 366 nt0.96□□□□□ -2.26
VPS55P47111 YNL067W-AYNL067W-A 147 nt0.96□□□□□ -2.26
VPS55P47111 GIM3YNL153C 390 nt0.96□□□□□ -2.26
VPS55P47111 BAG7YOR134W 1230 nt0.96□□□□□ -2.26
VPS55P47111 NOP12YOL041C 1380 nt0.96□□□□□ -2.26
VPS55P47111 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
VPS55P47111 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
VPS55P47111 PES4YFR023W 1836 nt0.95□□□□□ -2.26
VPS55P47111 YDR169C-AYDR169C-A 150 nt0.95□□□□□ -2.26
VPS55P47111 YER121WYER121W 345 nt0.95□□□□□ -2.26
VPS55P47111 TEN1YLR010C 483 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms