Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 CAF130YGR134W 3369 nt3.85□□□□□ -1.79
VPS53P47061 YGL007C-AYGL007C-A 87 nt3.85□□□□□ -1.79
VPS53P47061 YKL156C-AYKL156C-A 117 nt3.85□□□□□ -1.79
VPS53P47061 TRS120YDR407C 3870 nt3.85□□□□□ -1.79
VPS53P47061 YLR352WYLR352W 2424 nt3.85□□□□□ -1.79
VPS53P47061 SRB4YER022W 2064 nt3.84□□□□□ -1.79
VPS53P47061 PHM6YDR281C 315 nt3.84□□□□□ -1.79
VPS53P47061 ATP17YDR377W 306 nt3.84□□□□□ -1.79
VPS53P47061 YEL018C-AYEL018C-A 534 nt3.84□□□□□ -1.79
VPS53P47061 YMR122W-AYMR122W-A 255 nt3.84□□□□□ -1.79
VPS53P47061 SSN8YNL025C 972 nt3.84□□□□□ -1.79
VPS53P47061 HBT1YDL223C 3141 nt3.84□□□□□ -1.79
VPS53P47061 NDT80YHR124W 1884 nt3.84□□□□□ -1.8
VPS53P47061 LCB5YLR260W 2064 nt3.83□□□□□ -1.8
VPS53P47061 DAN4YJR151C 3486 nt3.83□□□□□ -1.8
VPS53P47061 YHR007C-AYHR007C-A 216 nt3.83□□□□□ -1.8
VPS53P47061 GEP4YHR100C 558 nt3.83□□□□□ -1.8
VPS53P47061 YLR294CYLR294C 330 nt3.83□□□□□ -1.8
VPS53P47061 RFC3YNL290W 1023 nt3.83□□□□□ -1.8
VPS53P47061 SLM6YBR266C 453 nt3.83□□□□□ -1.8
VPS53P47061 OSH6YKR003W 1347 nt3.83□□□□□ -1.8
VPS53P47061 YDR089WYDR089W 2610 nt3.83□□□□□ -1.8
VPS53P47061 RSC1YGR056W 2787 nt3.83□□□□□ -1.8
VPS53P47061 YDR464C-AYDR464C-A 189 nt3.82□□□□□ -1.8
VPS53P47061 CAJ1YER048C 1176 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)DtK(UUU)D 73 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)G1tK(UUU)G1 73 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)G2tK(UUU)G2 73 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)KtK(UUU)K 73 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)LtK(UUU)L 73 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)OtK(UUU)O 73 nt3.82□□□□□ -1.8
VPS53P47061 tK(UUU)PtK(UUU)P 73 nt3.82□□□□□ -1.8
VPS53P47061 RPL29YFR032C-A 180 nt3.82□□□□□ -1.8
VPS53P47061 NOP19YGR251W 591 nt3.82□□□□□ -1.8
VPS53P47061 RPS21BYJL136C 264 nt3.82□□□□□ -1.8
VPS53P47061 PAU23YLR037C 375 nt3.82□□□□□ -1.8
VPS53P47061 TVP18YMR071C 504 nt3.82□□□□□ -1.8
VPS53P47061 ISF1YMR081C 1017 nt3.82□□□□□ -1.8
VPS53P47061 PRP22YER013W 3438 nt3.82□□□□□ -1.8
VPS53P47061 STU1YBL034C 4542 nt3.82□□□□□ -1.8
VPS53P47061 YER076W-AYER076W-A 348 nt3.81□□□□□ -1.8
VPS53P47061 MSL1YIR009W 336 nt3.81□□□□□ -1.8
VPS53P47061 YIR040CYIR040C 333 nt3.81□□□□□ -1.8
VPS53P47061 YPL152W-AYPL152W-A 99 nt3.81□□□□□ -1.8
VPS53P47061 YPL238CYPL238C 390 nt3.81□□□□□ -1.8
VPS53P47061 FRE8YLR047C 2061 nt3.81□□□□□ -1.8
VPS53P47061 YKL100CYKL100C 1764 nt3.81□□□□□ -1.8
VPS53P47061 YDR183C-AYDR183C-A 258 nt3.8□□□□□ -1.8
VPS53P47061 RAD6YGL058W 519 nt3.8□□□□□ -1.8
VPS53P47061 BCD1YHR040W 1101 nt3.8□□□□□ -1.8
VPS53P47061 RPC10YHR143W-A 213 nt3.8□□□□□ -1.8
VPS53P47061 SOD1YJR104C 465 nt3.8□□□□□ -1.8
VPS53P47061 RPB11YOL005C 363 nt3.8□□□□□ -1.8
VPS53P47061 URA2YJL130C 6645 nt3.8□□□□□ -1.8
VPS53P47061 SPT16YGL207W 3108 nt3.8□□□□□ -1.8
VPS53P47061 NDD1YOR372C 1665 nt3.8□□□□□ -1.8
VPS53P47061 STE6YKL209C 3873 nt3.8□□□□□ -1.8
VPS53P47061 KIN82YCR091W 2163 nt3.79□□□□□ -1.8
VPS53P47061 CWH41YGL027C 2502 nt3.79□□□□□ -1.8
VPS53P47061 FRQ1YDR373W 573 nt3.79□□□□□ -1.8
VPS53P47061 YER066C-AYER066C-A 501 nt3.79□□□□□ -1.8
VPS53P47061 RPL15AYLR029C 615 nt3.79□□□□□ -1.8
VPS53P47061 PGA1YNL158W 597 nt3.79□□□□□ -1.8
VPS53P47061 SKP2YNL311C 2292 nt3.79□□□□□ -1.8
VPS53P47061 YLR001CYLR001C 2589 nt3.79□□□□□ -1.8
VPS53P47061 MYO3YKL129C 3819 nt3.78□□□□□ -1.8
VPS53P47061 SYT1YPR095C 3681 nt3.78□□□□□ -1.8
VPS53P47061 YDR250CYDR250C 276 nt3.78□□□□□ -1.8
VPS53P47061 YEL032C-AYEL032C-A 162 nt3.78□□□□□ -1.8
VPS53P47061 ERG28YER044C 447 nt3.78□□□□□ -1.8
VPS53P47061 tV(CAC)DtV(CAC)D 73 nt3.78□□□□□ -1.8
VPS53P47061 tV(CAC)HtV(CAC)H 73 nt3.78□□□□□ -1.8
VPS53P47061 LSM8YJR022W 330 nt3.78□□□□□ -1.8
VPS53P47061 BAR1YIL015W 1764 nt3.78□□□□□ -1.8
VPS53P47061 MES1YGR264C 2256 nt3.78□□□□□ -1.8
VPS53P47061 ALY1YKR021W 2748 nt3.78□□□□□ -1.8
VPS53P47061 YER107W-AYER107W-A 321 nt3.77□□□□□ -1.81
VPS53P47061 FCF2YLR051C 654 nt3.77□□□□□ -1.81
VPS53P47061 APC9YLR102C 798 nt3.77□□□□□ -1.81
VPS53P47061 PRE8YML092C 753 nt3.77□□□□□ -1.81
VPS53P47061 RPL23AYBL087C 414 nt3.77□□□□□ -1.81
VPS53P47061 SPA2YLL021W 4401 nt3.77□□□□□ -1.81
VPS53P47061 MPS1YDL028C 2295 nt3.77□□□□□ -1.81
VPS53P47061 DPB11YJL090C 2295 nt3.77□□□□□ -1.81
VPS53P47061 TAF1YGR274C 3201 nt3.76□□□□□ -1.81
VPS53P47061 BMS1YPL217C 3552 nt3.76□□□□□ -1.81
VPS53P47061 TOP1YOL006C 2310 nt3.76□□□□□ -1.81
VPS53P47061 YER188C-AYER188C-A 300 nt3.76□□□□□ -1.81
VPS53P47061 YFL065CYFL065C 309 nt3.76□□□□□ -1.81
VPS53P47061 YJL015CYJL015C 285 nt3.76□□□□□ -1.81
VPS53P47061 YJR023CYJR023C 402 nt3.76□□□□□ -1.81
VPS53P47061 ANB1YJR047C 474 nt3.76□□□□□ -1.81
VPS53P47061 YKL033W-AYKL033W-A 711 nt3.76□□□□□ -1.81
VPS53P47061 TIM12YBR091C 330 nt3.76□□□□□ -1.81
VPS53P47061 CPA2YJR109C 3357 nt3.76□□□□□ -1.81
VPS53P47061 MDN1YLR106C 14733 nt3.76□□□□□ -1.81
VPS53P47061 PDS5YMR076C 3834 nt3.76□□□□□ -1.81
VPS53P47061 SNX41YDR425W 1878 nt3.75□□□□□ -1.81
VPS53P47061 MDM32YOR147W 1869 nt3.75□□□□□ -1.81
VPS53P47061 RMT2YDR465C 1239 nt3.75□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms