Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YGL165CYGL165C 579 nt3.51□□□□□ -1.85
TY4A-JP47023 LAG1YHL003C 1236 nt3.51□□□□□ -1.85
TY4A-JP47023 COX23YHR116W 456 nt3.51□□□□□ -1.85
TY4A-JP47023 CRG1YHR209W 876 nt3.51□□□□□ -1.85
TY4A-JP47023 YML099W-AYML099W-A 330 nt3.51□□□□□ -1.85
TY4A-JP47023 SIP18YMR175W 240 nt3.51□□□□□ -1.85
TY4A-JP47023 YBL065WYBL065W 345 nt3.51□□□□□ -1.85
TY4A-JP47023 CDC33YOL139C 642 nt3.51□□□□□ -1.85
TY4A-JP47023 YPL197CYPL197C 414 nt3.51□□□□□ -1.85
TY4A-JP47023 TIM12YBR091C 330 nt3.51□□□□□ -1.85
TY4A-JP47023 NET1YJL076W 3570 nt3.51□□□□□ -1.85
TY4A-JP47023 STT4YLR305C 5703 nt3.51□□□□□ -1.85
TY4A-JP47023 GCN1YGL195W 8019 nt3.51□□□□□ -1.85
TY4A-JP47023 RAD6YGL058W 519 nt3.5□□□□□ -1.85
TY4A-JP47023 UNG1YML021C 1080 nt3.5□□□□□ -1.85
TY4A-JP47023 RDS1YCR106W 2499 nt3.5□□□□□ -1.85
TY4A-JP47023 SPT10YJL127C 1923 nt3.5□□□□□ -1.85
TY4A-JP47023 TFB1YDR311W 1929 nt3.49□□□□□ -1.85
TY4A-JP47023 FMP32YFL046W 624 nt3.49□□□□□ -1.85
TY4A-JP47023 RPS20YHL015W 366 nt3.49□□□□□ -1.85
TY4A-JP47023 RPL40BYKR094C 387 nt3.49□□□□□ -1.85
TY4A-JP47023 YOR199WYOR199W 330 nt3.49□□□□□ -1.85
TY4A-JP47023 DGK1YOR311C 873 nt3.49□□□□□ -1.85
TY4A-JP47023 YPL185WYPL185W 396 nt3.49□□□□□ -1.85
TY4A-JP47023 PKH1YDR490C 2301 nt3.49□□□□□ -1.85
TY4A-JP47023 STN1YDR082W 1485 nt3.48□□□□□ -1.85
TY4A-JP47023 MET6YER091C 2304 nt3.48□□□□□ -1.85
TY4A-JP47023 RRM3YHR031C 2172 nt3.48□□□□□ -1.85
TY4A-JP47023 LOS1YKL205W 3303 nt3.48□□□□□ -1.85
TY4A-JP47023 YHR214W-AYHR214W-A 486 nt3.48□□□□□ -1.85
TY4A-JP47023 YKL136WYKL136W 399 nt3.48□□□□□ -1.85
TY4A-JP47023 YAL063C-AYAL063C-A 291 nt3.48□□□□□ -1.85
TY4A-JP47023 YAR068WYAR068W 486 nt3.48□□□□□ -1.85
TY4A-JP47023 LSM2YBL026W 288 nt3.48□□□□□ -1.85
TY4A-JP47023 RNH70YGR276C 1662 nt3.48□□□□□ -1.85
TY4A-JP47023 CCT7YJL111W 1653 nt3.48□□□□□ -1.85
TY4A-JP47023 HFD1YMR110C 1599 nt3.47□□□□□ -1.85
TY4A-JP47023 ROY1YMR258C 1662 nt3.47□□□□□ -1.85
TY4A-JP47023 AI2Q0055 2565 nt3.47□□□□□ -1.85
TY4A-JP47023 YDL240C-AYDL240C-A 138 nt3.47□□□□□ -1.85
TY4A-JP47023 YIL012WYIL012W 342 nt3.47□□□□□ -1.85
TY4A-JP47023 DLS1YJL065C 504 nt3.47□□□□□ -1.85
TY4A-JP47023 RIM11YMR139W 1113 nt3.47□□□□□ -1.85
TY4A-JP47023 NIC96YFR002W 2520 nt3.46□□□□□ -1.85
TY4A-JP47023 BFR1YOR198C 1413 nt3.46□□□□□ -1.86
TY4A-JP47023 SDH7YDR511W 402 nt3.46□□□□□ -1.86
TY4A-JP47023 YER107W-AYER107W-A 321 nt3.46□□□□□ -1.86
TY4A-JP47023 MTC3YGL226W 372 nt3.46□□□□□ -1.86
TY4A-JP47023 RNR4YGR180C 1038 nt3.46□□□□□ -1.86
TY4A-JP47023 YJR023CYJR023C 402 nt3.46□□□□□ -1.86
TY4A-JP47023 YAL064W-BYAL064W-B 381 nt3.46□□□□□ -1.86
TY4A-JP47023 RPL20BYOR312C 519 nt3.46□□□□□ -1.86
TY4A-JP47023 YPR108W-AYPR108W-A 213 nt3.46□□□□□ -1.86
TY4A-JP47023 KAP104YBR017C 2757 nt3.46□□□□□ -1.86
TY4A-JP47023 YPR022CYPR022C 3402 nt3.46□□□□□ -1.86
TY4A-JP47023 MTR4YJL050W 3222 nt3.46□□□□□ -1.86
TY4A-JP47023 TAO3YIL129C 7131 nt3.45□□□□□ -1.86
TY4A-JP47023 SSM4YIL030C 3960 nt3.45□□□□□ -1.86
TY4A-JP47023 YSW1YBR148W 1830 nt3.45□□□□□ -1.86
TY4A-JP47023 ATP17YDR377W 306 nt3.45□□□□□ -1.86
TY4A-JP47023 RTT102YGR275W 474 nt3.45□□□□□ -1.86
TY4A-JP47023 BAT1YHR208W 1182 nt3.45□□□□□ -1.86
TY4A-JP47023 YIL115W-AYIL115W-A 372 nt3.45□□□□□ -1.86
TY4A-JP47023 YKL111CYKL111C 336 nt3.45□□□□□ -1.86
TY4A-JP47023 TEN1YLR010C 483 nt3.45□□□□□ -1.86
TY4A-JP47023 ZEO1YOL109W 342 nt3.45□□□□□ -1.86
TY4A-JP47023 YPL038W-AYPL038W-A 192 nt3.45□□□□□ -1.86
TY4A-JP47023 LRG1YDL240W 3054 nt3.45□□□□□ -1.86
TY4A-JP47023 AUS1YOR011W 4185 nt3.45□□□□□ -1.86
TY4A-JP47023 SIP3YNL257C 3690 nt3.45□□□□□ -1.86
TY4A-JP47023 GNT1YOR320C 1476 nt3.44□□□□□ -1.86
TY4A-JP47023 IRC4YDR540C 540 nt3.44□□□□□ -1.86
TY4A-JP47023 JIP3YLR331C 378 nt3.44□□□□□ -1.86
TY4A-JP47023 YMR294W-AYMR294W-A 360 nt3.44□□□□□ -1.86
TY4A-JP47023 ISU1YPL135W 498 nt3.44□□□□□ -1.86
TY4A-JP47023 SLM6YBR266C 453 nt3.44□□□□□ -1.86
TY4A-JP47023 NDT80YHR124W 1884 nt3.43□□□□□ -1.86
TY4A-JP47023 LEU3YLR451W 2661 nt3.43□□□□□ -1.86
TY4A-JP47023 NPR1YNL183C 2373 nt3.43□□□□□ -1.86
TY4A-JP47023 APC11YDL008W 498 nt3.43□□□□□ -1.86
TY4A-JP47023 USE1YGL098W 738 nt3.43□□□□□ -1.86
TY4A-JP47023 YIL054WYIL054W 318 nt3.43□□□□□ -1.86
TY4A-JP47023 RPS1AYLR441C 768 nt3.43□□□□□ -1.86
TY4A-JP47023 PEX17YNL214W 600 nt3.43□□□□□ -1.86
TY4A-JP47023 YOL159C-AYOL159C-A 273 nt3.43□□□□□ -1.86
TY4A-JP47023 RCY1YJL204C 2523 nt3.43□□□□□ -1.86
TY4A-JP47023 SEN54YPL083C 1404 nt3.43□□□□□ -1.86
TY4A-JP47023 BOI1YBL085W 2943 nt3.43□□□□□ -1.86
TY4A-JP47023 YSP2YDR326C 4317 nt3.42□□□□□ -1.86
TY4A-JP47023 HPA3YEL066W 540 nt3.42□□□□□ -1.86
TY4A-JP47023 YJR079WYJR079W 330 nt3.42□□□□□ -1.86
TY4A-JP47023 VPS53YJL029C 2469 nt3.42□□□□□ -1.86
TY4A-JP47023 YOL057WYOL057W 2136 nt3.41□□□□□ -1.86
TY4A-JP47023 RAD2YGR258C 3096 nt3.41□□□□□ -1.86
TY4A-JP47023 CSR2YPR030W 3366 nt3.41□□□□□ -1.86
TY4A-JP47023 RPL27BYDR471W 411 nt3.41□□□□□ -1.86
TY4A-JP47023 YOL019W-AYOL019W-A 153 nt3.41□□□□□ -1.86
TY4A-JP47023 ERP4YOR016C 624 nt3.41□□□□□ -1.86
TY4A-JP47023 TRZ1YKR079C 2517 nt3.41□□□□□ -1.86
TY4A-JP47023 DPB11YJL090C 2295 nt3.41□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms