Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.86■□□□□ 0.93
GRIA1P42261 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.86■□□□□ 0.93
GRIA1P42261 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 AL512408.1-201ENST00000569378 2000 ntBASIC20.86■□□□□ 0.93
GRIA1P42261 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GRIA1P42261 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GRIA1P42261 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.85■□□□□ 0.93
GRIA1P42261 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.85■□□□□ 0.93
GRIA1P42261 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.85■□□□□ 0.93
GRIA1P42261 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.85■□□□□ 0.93
GRIA1P42261 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GRIA1P42261 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.85■□□□□ 0.93
GRIA1P42261 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.84■□□□□ 0.93
GRIA1P42261 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
GRIA1P42261 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.84■□□□□ 0.93
GRIA1P42261 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GRIA1P42261 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GRIA1P42261 AC112907.3-201ENST00000577781 2400 ntBASIC20.84■□□□□ 0.93
GRIA1P42261 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
GRIA1P42261 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA1P42261 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA1P42261 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.83■□□□□ 0.93
GRIA1P42261 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA1P42261 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA1P42261 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
GRIA1P42261 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
GRIA1P42261 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.83■□□□□ 0.93
GRIA1P42261 KRT18P20-201ENST00000548986 1279 ntBASIC20.83■□□□□ 0.93
GRIA1P42261 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.83■□□□□ 0.93
GRIA1P42261 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.83■□□□□ 0.93
GRIA1P42261 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
GRIA1P42261 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA1P42261 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GRIA1P42261 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GRIA1P42261 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GRIA1P42261 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.82■□□□□ 0.92
GRIA1P42261 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GRIA1P42261 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.82■□□□□ 0.92
GRIA1P42261 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.82■□□□□ 0.92
GRIA1P42261 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.82■□□□□ 0.92
GRIA1P42261 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GRIA1P42261 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.82■□□□□ 0.92
GRIA1P42261 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GRIA1P42261 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.82■□□□□ 0.92
GRIA1P42261 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.82■□□□□ 0.92
GRIA1P42261 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GRIA1P42261 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRIA1P42261 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.82■□□□□ 0.92
GRIA1P42261 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GRIA1P42261 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA1P42261 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA1P42261 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA1P42261 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA1P42261 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
GRIA1P42261 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA1P42261 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.81■□□□□ 0.92
GRIA1P42261 RBM17P2-201ENST00000616397 1405 ntBASIC20.81■□□□□ 0.92
GRIA1P42261 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRIA1P42261 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms