Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YDR338CYDR338C 2088 nt4.07□□□□□ -1.76
MSH4P40965 FLO9YAL063C 3969 nt4.07□□□□□ -1.76
MSH4P40965 HOP1YIL072W 1818 nt4.07□□□□□ -1.76
MSH4P40965 RNR1YER070W 2667 nt4.07□□□□□ -1.76
MSH4P40965 MTR4YJL050W 3222 nt4.06□□□□□ -1.76
MSH4P40965 TIF4631YGR162W 2859 nt4.06□□□□□ -1.76
MSH4P40965 AIM11YER093C-A 414 nt4.06□□□□□ -1.76
MSH4P40965 YFR054CYFR054C 579 nt4.06□□□□□ -1.76
MSH4P40965 RPL15AYLR029C 615 nt4.06□□□□□ -1.76
MSH4P40965 PDS5YMR076C 3834 nt4.06□□□□□ -1.76
MSH4P40965 TIR2YOR010C 756 nt4.06□□□□□ -1.76
MSH4P40965 YOR385WYOR385W 873 nt4.06□□□□□ -1.76
MSH4P40965 RED1YLR263W 2484 nt4.05□□□□□ -1.76
MSH4P40965 MPS1YDL028C 2295 nt4.05□□□□□ -1.76
MSH4P40965 ICR1ICR1 3199 nt4.05□□□□□ -1.76
MSH4P40965 PEX1YKL197C 3132 nt4.05□□□□□ -1.76
MSH4P40965 RAD5YLR032W 3510 nt4.05□□□□□ -1.76
MSH4P40965 YDL176WYDL176W 2127 nt4.05□□□□□ -1.76
MSH4P40965 YPR099CYPR099C 357 nt4.05□□□□□ -1.76
MSH4P40965 YCK2YNL154C 1641 nt4.05□□□□□ -1.76
MSH4P40965 HFM1YGL251C 3564 nt4.05□□□□□ -1.76
MSH4P40965 TRS120YDR407C 3870 nt4.04□□□□□ -1.76
MSH4P40965 YDR061WYDR061W 1620 nt4.04□□□□□ -1.76
MSH4P40965 YDR183C-AYDR183C-A 258 nt4.04□□□□□ -1.76
MSH4P40965 YGR242WYGR242W 309 nt4.04□□□□□ -1.76
MSH4P40965 FCF2YLR051C 654 nt4.04□□□□□ -1.76
MSH4P40965 YOL160WYOL160W 342 nt4.04□□□□□ -1.76
MSH4P40965 SRC1YML034W 2505 nt4.04□□□□□ -1.76
MSH4P40965 GPI8YDR331W 1236 nt4.03□□□□□ -1.76
MSH4P40965 CYC7YEL039C 342 nt4.03□□□□□ -1.76
MSH4P40965 SIP18YMR175W 240 nt4.03□□□□□ -1.76
MSH4P40965 URA10YMR271C 684 nt4.03□□□□□ -1.76
MSH4P40965 RSM19YNR037C 276 nt4.03□□□□□ -1.76
MSH4P40965 snR13snR13 124 nt4.03□□□□□ -1.76
MSH4P40965 YBR259WYBR259W 2067 nt4.02□□□□□ -1.77
MSH4P40965 CEP3YMR168C 1827 nt4.02□□□□□ -1.77
MSH4P40965 ZDS2YML109W 2829 nt4.02□□□□□ -1.77
MSH4P40965 PWP2YCR057C 2772 nt4.02□□□□□ -1.77
MSH4P40965 BCD1YHR040W 1101 nt4.02□□□□□ -1.77
MSH4P40965 tW(UCA)QtW(UCA)Q 74 nt4.02□□□□□ -1.77
MSH4P40965 YJL202CYJL202C 348 nt4.02□□□□□ -1.77
MSH4P40965 MRP8YKL142W 660 nt4.02□□□□□ -1.77
MSH4P40965 YLR230WYLR230W 306 nt4.02□□□□□ -1.77
MSH4P40965 YBL008W-AYBL008W-A 240 nt4.02□□□□□ -1.77
MSH4P40965 YOR073W-AYOR073W-A 234 nt4.02□□□□□ -1.77
MSH4P40965 YPR077CYPR077C 372 nt4.02□□□□□ -1.77
MSH4P40965 FRE8YLR047C 2061 nt4.02□□□□□ -1.77
MSH4P40965 21S_rRNA21S_rRNA 3296 nt4.02□□□□□ -1.77
MSH4P40965 TAF1YGR274C 3201 nt4.01□□□□□ -1.77
MSH4P40965 SEA4YBL104C 3117 nt4.01□□□□□ -1.77
MSH4P40965 snR80snR80 171 nt4.01□□□□□ -1.77
MSH4P40965 YDR442WYDR442W 393 nt4.01□□□□□ -1.77
MSH4P40965 YHR214W-AYHR214W-A 486 nt4.01□□□□□ -1.77
MSH4P40965 ANB1YJR047C 474 nt4.01□□□□□ -1.77
MSH4P40965 YAR068WYAR068W 486 nt4.01□□□□□ -1.77
MSH4P40965 YMR122W-AYMR122W-A 255 nt4.01□□□□□ -1.77
MSH4P40965 YBR137WYBR137W 540 nt4.01□□□□□ -1.77
MSH4P40965 SPA2YLL021W 4401 nt4.01□□□□□ -1.77
MSH4P40965 MUS81YDR386W 1899 nt4.01□□□□□ -1.77
MSH4P40965 VBA4YDR119W 2307 nt4□□□□□ -1.77
MSH4P40965 YER079C-AYER079C-A 339 nt4□□□□□ -1.77
MSH4P40965 CDC26YFR036W 375 nt4□□□□□ -1.77
MSH4P40965 YHR139C-AYHR139C-A 312 nt4□□□□□ -1.77
MSH4P40965 YPL142CYPL142C 318 nt4□□□□□ -1.77
MSH4P40965 SSM4YIL030C 3960 nt4□□□□□ -1.77
MSH4P40965 ATP8Q0080 147 nt3.99□□□□□ -1.77
MSH4P40965 MSL1YIR009W 336 nt3.99□□□□□ -1.77
MSH4P40965 RSC1YGR056W 2787 nt3.99□□□□□ -1.77
MSH4P40965 SNT1YCR033W 3681 nt3.98□□□□□ -1.77
MSH4P40965 NOT5YPR072W 1683 nt3.98□□□□□ -1.77
MSH4P40965 YER039C-AYER039C-A 219 nt3.98□□□□□ -1.77
MSH4P40965 CAJ1YER048C 1176 nt3.98□□□□□ -1.77
MSH4P40965 AST2YER101C 1293 nt3.98□□□□□ -1.77
MSH4P40965 YFL063WYFL063W 456 nt3.98□□□□□ -1.77
MSH4P40965 YGL188C-AYGL188C-A 141 nt3.98□□□□□ -1.77
MSH4P40965 YLR302CYLR302C 363 nt3.98□□□□□ -1.77
MSH4P40965 OST6YML019W 999 nt3.98□□□□□ -1.77
MSH4P40965 SSN8YNL025C 972 nt3.98□□□□□ -1.77
MSH4P40965 RFC3YNL290W 1023 nt3.98□□□□□ -1.77
MSH4P40965 HSP10YOR020C 321 nt3.98□□□□□ -1.77
MSH4P40965 DGK1YOR311C 873 nt3.98□□□□□ -1.77
MSH4P40965 YEL1YBL060W 2064 nt3.98□□□□□ -1.77
MSH4P40965 REG1YDR028C 3045 nt3.97□□□□□ -1.77
MSH4P40965 YER076W-AYER076W-A 348 nt3.97□□□□□ -1.77
MSH4P40965 YIL012WYIL012W 342 nt3.97□□□□□ -1.77
MSH4P40965 YNL179CYNL179C 438 nt3.97□□□□□ -1.77
MSH4P40965 UBP5YER144C 2418 nt3.97□□□□□ -1.77
MSH4P40965 KAP95YLR347C 2586 nt3.97□□□□□ -1.77
MSH4P40965 BMS1YPL217C 3552 nt3.97□□□□□ -1.77
MSH4P40965 SEC15YGL233W 2733 nt3.96□□□□□ -1.78
MSH4P40965 ATP17YDR377W 306 nt3.96□□□□□ -1.78
MSH4P40965 YER023C-AYER023C-A 213 nt3.96□□□□□ -1.78
MSH4P40965 RRT13YER066W 558 nt3.96□□□□□ -1.78
MSH4P40965 PET191YJR034W 327 nt3.96□□□□□ -1.78
MSH4P40965 SMA2YML066C 1110 nt3.96□□□□□ -1.78
MSH4P40965 PGA1YNL158W 597 nt3.96□□□□□ -1.78
MSH4P40965 CBP2YHL038C 1893 nt3.96□□□□□ -1.78
MSH4P40965 MAL33YBR297W 1407 nt3.95□□□□□ -1.78
MSH4P40965 GYL1YMR192W 2163 nt3.95□□□□□ -1.78
MSH4P40965 ETP1YHL010C 1758 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 67.9 ms