Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.82■□□□□ 0.6
SHC1P29353 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.82■□□□□ 0.6
SHC1P29353 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHC1P29353 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC1P29353 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.81■□□□□ 0.6
SHC1P29353 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.81■□□□□ 0.6
SHC1P29353 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.81■□□□□ 0.6
SHC1P29353 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC1P29353 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC1P29353 BID-214ENST00000617586 542 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.81■□□□□ 0.6
SHC1P29353 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.81■□□□□ 0.6
SHC1P29353 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SHC1P29353 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SHC1P29353 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHC1P29353 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHC1P29353 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.8■□□□□ 0.6
SHC1P29353 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SHC1P29353 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHC1P29353 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.8■□□□□ 0.6
SHC1P29353 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.8■□□□□ 0.6
SHC1P29353 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC1P29353 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 SLC7A5P1-201ENST00000568957 537 ntBASIC18.79■□□□□ 0.6
SHC1P29353 AC010536.3-201ENST00000620306 533 ntBASIC18.79■□□□□ 0.6
SHC1P29353 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHC1P29353 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.79■□□□□ 0.6
SHC1P29353 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC1P29353 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC1P29353 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.78■□□□□ 0.6
SHC1P29353 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.78■□□□□ 0.6
SHC1P29353 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.78■□□□□ 0.6
SHC1P29353 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SHC1P29353 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHC1P29353 DUX4L16-201ENST00000555130 1264 ntBASIC18.78■□□□□ 0.6
SHC1P29353 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.78■□□□□ 0.6
SHC1P29353 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.78■□□□□ 0.6
SHC1P29353 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 AC080038.1-201ENST00000611274 1154 ntBASIC18.78■□□□□ 0.6
SHC1P29353 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.78■□□□□ 0.6
SHC1P29353 RARRES2P11-201ENST00000635158 484 ntBASIC18.78■□□□□ 0.6
SHC1P29353 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SHC1P29353 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SHC1P29353 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
SHC1P29353 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHC1P29353 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC1P29353 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC1P29353 RBM17P2-201ENST00000616397 1405 ntBASIC18.77■□□□□ 0.6
SHC1P29353 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC1P29353 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC1P29353 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms