Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 tK(CUU)ItK(CUU)I 73 nt4.99□□□□□ -1.61
SPB4P25808 tK(CUU)JtK(CUU)J 73 nt4.99□□□□□ -1.61
SPB4P25808 tK(CUU)KtK(CUU)K 73 nt4.99□□□□□ -1.61
SPB4P25808 tK(CUU)MtK(CUU)M 73 nt4.99□□□□□ -1.61
SPB4P25808 tK(CUU)PtK(CUU)P 73 nt4.99□□□□□ -1.61
SPB4P25808 YMR307C-AYMR307C-A 195 nt4.99□□□□□ -1.61
SPB4P25808 snR49snR49 165 nt4.99□□□□□ -1.61
SPB4P25808 NUP2YLR335W 2163 nt4.99□□□□□ -1.61
SPB4P25808 YDR250CYDR250C 276 nt4.98□□□□□ -1.61
SPB4P25808 RIP1YEL024W 648 nt4.98□□□□□ -1.61
SPB4P25808 PFD1YJL179W 330 nt4.98□□□□□ -1.61
SPB4P25808 SDH2YLL041C 801 nt4.98□□□□□ -1.61
SPB4P25808 ABF2YMR072W 552 nt4.98□□□□□ -1.61
SPB4P25808 ATP25YMR098C 1839 nt4.97□□□□□ -1.61
SPB4P25808 YDL176WYDL176W 2127 nt4.97□□□□□ -1.61
SPB4P25808 MZM1YDR493W 372 nt4.97□□□□□ -1.61
SPB4P25808 YDR545C-AYDR545C-A 480 nt4.97□□□□□ -1.61
SPB4P25808 ALG13YGL047W 609 nt4.97□□□□□ -1.61
SPB4P25808 RPL14BYHL001W 417 nt4.97□□□□□ -1.61
SPB4P25808 HEM4YOR278W 828 nt4.97□□□□□ -1.61
SPB4P25808 TRZ1YKR079C 2517 nt4.97□□□□□ -1.61
SPB4P25808 ARK1YNL020C 1917 nt4.97□□□□□ -1.61
SPB4P25808 PDC2YDR081C 2778 nt4.97□□□□□ -1.61
SPB4P25808 PRK1YIL095W 2433 nt4.96□□□□□ -1.61
SPB4P25808 MET4YNL103W 2019 nt4.96□□□□□ -1.62
SPB4P25808 TMA17YDL110C 453 nt4.96□□□□□ -1.62
SPB4P25808 DAD4YDR320C-A 219 nt4.96□□□□□ -1.62
SPB4P25808 YHL006W-AYHL006W-A 354 nt4.96□□□□□ -1.62
SPB4P25808 OSH2YDL019C 3852 nt4.96□□□□□ -1.62
SPB4P25808 TOM70YNL121C 1854 nt4.96□□□□□ -1.62
SPB4P25808 TPS2YDR074W 2691 nt4.96□□□□□ -1.62
SPB4P25808 YFH1YDL120W 525 nt4.95□□□□□ -1.62
SPB4P25808 RPL35AYDL191W 363 nt4.95□□□□□ -1.62
SPB4P25808 YAL059C-AYAL059C-A 423 nt4.95□□□□□ -1.62
SPB4P25808 NKP2YLR315W 462 nt4.95□□□□□ -1.62
SPB4P25808 YLR466C-BYLR466C-B 117 nt4.95□□□□□ -1.62
SPB4P25808 RSM19YNR037C 276 nt4.95□□□□□ -1.62
SPB4P25808 RPS23BYPR132W 438 nt4.95□□□□□ -1.62
SPB4P25808 YGR237CYGR237C 2358 nt4.95□□□□□ -1.62
SPB4P25808 CAF130YGR134W 3369 nt4.95□□□□□ -1.62
SPB4P25808 ROD1YOR018W 2514 nt4.94□□□□□ -1.62
SPB4P25808 ECM16YMR128W 3804 nt4.94□□□□□ -1.62
SPB4P25808 VHS3YOR054C 2025 nt4.94□□□□□ -1.62
SPB4P25808 YEL020C-BYEL020C-B 198 nt4.94□□□□□ -1.62
SPB4P25808 PAM16YJL104W 450 nt4.94□□□□□ -1.62
SPB4P25808 FBP1YLR377C 1047 nt4.94□□□□□ -1.62
SPB4P25808 ASC1YMR116C 960 nt4.94□□□□□ -1.62
SPB4P25808 YOR050CYOR050C 348 nt4.94□□□□□ -1.62
SPB4P25808 UBP5YER144C 2418 nt4.94□□□□□ -1.62
SPB4P25808 SSY1YDR160W 2559 nt4.94□□□□□ -1.62
SPB4P25808 YPK9YOR291W 4419 nt4.94□□□□□ -1.62
SPB4P25808 FMP46YKR049C 402 nt4.93□□□□□ -1.62
SPB4P25808 GYL1YMR192W 2163 nt4.93□□□□□ -1.62
SPB4P25808 NAN1YPL126W 2691 nt4.93□□□□□ -1.62
SPB4P25808 SGO1YOR073W 1773 nt4.93□□□□□ -1.62
SPB4P25808 YGR151CYGR151C 336 nt4.92□□□□□ -1.62
SPB4P25808 YAL047W-AYAL047W-A 330 nt4.92□□□□□ -1.62
SPB4P25808 YOR008C-AYOR008C-A 225 nt4.92□□□□□ -1.62
SPB4P25808 YPL182CYPL182C 384 nt4.92□□□□□ -1.62
SPB4P25808 RAD1YPL022W 3303 nt4.92□□□□□ -1.62
SPB4P25808 NUP133YKR082W 3474 nt4.91□□□□□ -1.62
SPB4P25808 GPI14YJR013W 1212 nt4.91□□□□□ -1.62
SPB4P25808 YOR072W-AYOR072W-A 249 nt4.91□□□□□ -1.62
SPB4P25808 NMA111YNL123W 2994 nt4.91□□□□□ -1.62
SPB4P25808 RPG1YBR079C 2895 nt4.9□□□□□ -1.62
SPB4P25808 ISA1YLL027W 753 nt4.9□□□□□ -1.63
SPB4P25808 GAL11YOL051W 3246 nt4.9□□□□□ -1.63
SPB4P25808 SEN1YLR430W 6696 nt4.9□□□□□ -1.63
SPB4P25808 GPI10YGL142C 1851 nt4.9□□□□□ -1.63
SPB4P25808 YJL016WYJL016W 1686 nt4.89□□□□□ -1.63
SPB4P25808 YLL032CYLL032C 2478 nt4.89□□□□□ -1.63
SPB4P25808 STN1YDR082W 1485 nt4.89□□□□□ -1.63
SPB4P25808 VPS41YDR080W 2979 nt4.89□□□□□ -1.63
SPB4P25808 YGR174W-AYGR174W-A 87 nt4.89□□□□□ -1.63
SPB4P25808 NCE101YJL205C 162 nt4.89□□□□□ -1.63
SPB4P25808 RPS18BYML026C 441 nt4.89□□□□□ -1.63
SPB4P25808 snR42snR42 351 nt4.89□□□□□ -1.63
SPB4P25808 MGR1YCL044C 1254 nt4.89□□□□□ -1.63
SPB4P25808 GCR1YPL075W 2358 nt4.89□□□□□ -1.63
SPB4P25808 TRS85YDR108W 2097 nt4.88□□□□□ -1.63
SPB4P25808 AIM9YER080W 1884 nt4.88□□□□□ -1.63
SPB4P25808 SUP56tL(CAA)A 82 nt4.88□□□□□ -1.63
SPB4P25808 SUP53tL(CAA)C 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)DtL(CAA)D 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)G1tL(CAA)G1 82 nt4.88□□□□□ -1.63
SPB4P25808 SUP54tL(CAA)G2 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)G3tL(CAA)G3 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)KtL(CAA)K 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)LtL(CAA)L 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)MtL(CAA)M 82 nt4.88□□□□□ -1.63
SPB4P25808 tL(CAA)NtL(CAA)N 82 nt4.88□□□□□ -1.63
SPB4P25808 Q0143Q0143 153 nt4.88□□□□□ -1.63
SPB4P25808 YIL058WYIL058W 285 nt4.88□□□□□ -1.63
SPB4P25808 HSK3YKL138C-A 210 nt4.88□□□□□ -1.63
SPB4P25808 PEX11YOL147C 711 nt4.88□□□□□ -1.63
SPB4P25808 YOL155W-AYOL155W-A 135 nt4.88□□□□□ -1.63
SPB4P25808 snR191snR191 274 nt4.88□□□□□ -1.63
SPB4P25808 APC1YNL172W 5247 nt4.88□□□□□ -1.63
SPB4P25808 KIN2YLR096W 3444 nt4.88□□□□□ -1.63
SPB4P25808 FLO8YER109C 2400 nt4.87□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms