Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ERCC3P19447 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ERCC3P19447 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.81■■□□□ 1.4
ERCC3P19447 UNC93B4-201ENST00000505679 747 ntBASIC23.81■■□□□ 1.4
ERCC3P19447 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC3P19447 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.81■■□□□ 1.4
ERCC3P19447 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.81■■□□□ 1.4
ERCC3P19447 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
ERCC3P19447 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ERCC3P19447 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ERCC3P19447 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.8■■□□□ 1.4
ERCC3P19447 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ERCC3P19447 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ERCC3P19447 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ERCC3P19447 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.8■■□□□ 1.4
ERCC3P19447 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.8■■□□□ 1.4
ERCC3P19447 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.8■■□□□ 1.4
ERCC3P19447 AC007322.3-201ENST00000426526 701 ntBASIC23.8■■□□□ 1.4
ERCC3P19447 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.8■■□□□ 1.4
ERCC3P19447 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.79■■□□□ 1.4
ERCC3P19447 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.79■■□□□ 1.4
ERCC3P19447 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ERCC3P19447 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.79■■□□□ 1.4
ERCC3P19447 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.79■■□□□ 1.4
ERCC3P19447 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.79■■□□□ 1.4
ERCC3P19447 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.79■■□□□ 1.4
ERCC3P19447 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
ERCC3P19447 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.79■■□□□ 1.4
ERCC3P19447 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ERCC3P19447 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.79■■□□□ 1.4
ERCC3P19447 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ERCC3P19447 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 AC007375.3-201ENST00000600936 2314 ntBASIC23.78■■□□□ 1.4
ERCC3P19447 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ERCC3P19447 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.78■■□□□ 1.4
ERCC3P19447 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.78■■□□□ 1.4
ERCC3P19447 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.78■■□□□ 1.4
ERCC3P19447 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ERCC3P19447 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
ERCC3P19447 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.78■■□□□ 1.4
ERCC3P19447 PNMA6B-201ENST00000538162 1200 ntBASIC23.78■■□□□ 1.4
ERCC3P19447 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.78■■□□□ 1.4
ERCC3P19447 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.78■■□□□ 1.4
ERCC3P19447 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.78■■□□□ 1.4
ERCC3P19447 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ERCC3P19447 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.77■■□□□ 1.4
ERCC3P19447 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.77■■□□□ 1.4
ERCC3P19447 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ERCC3P19447 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ERCC3P19447 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
ERCC3P19447 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ERCC3P19447 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.76■■□□□ 1.39
ERCC3P19447 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
ERCC3P19447 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.76■■□□□ 1.39
ERCC3P19447 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.76■■□□□ 1.39
ERCC3P19447 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.76■■□□□ 1.39
ERCC3P19447 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.76■■□□□ 1.39
ERCC3P19447 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.76■■□□□ 1.39
ERCC3P19447 AL359736.2-201ENST00000621992 437 ntBASIC23.76■■□□□ 1.39
ERCC3P19447 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ERCC3P19447 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ERCC3P19447 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ERCC3P19447 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ERCC3P19447 AC092368.3-202ENST00000574180 1591 ntBASIC23.75■■□□□ 1.39
ERCC3P19447 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ERCC3P19447 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ERCC3P19447 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms