Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCLP18206 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
VCLP18206 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 AF106564.1-201ENST00000607058 2553 ntBASIC20.62■□□□□ 0.89
VCLP18206 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.62■□□□□ 0.89
VCLP18206 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.62■□□□□ 0.89
VCLP18206 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VCLP18206 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.62■□□□□ 0.89
VCLP18206 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.62■□□□□ 0.89
VCLP18206 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.62■□□□□ 0.89
VCLP18206 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.62■□□□□ 0.89
VCLP18206 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.62■□□□□ 0.89
VCLP18206 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.62■□□□□ 0.89
VCLP18206 SLC7A5P2-201ENST00000553010 536 ntBASIC20.62■□□□□ 0.89
VCLP18206 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.62■□□□□ 0.89
VCLP18206 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.62■□□□□ 0.89
VCLP18206 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
VCLP18206 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCLP18206 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.62■□□□□ 0.89
VCLP18206 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VCLP18206 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
VCLP18206 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VCLP18206 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.61■□□□□ 0.89
VCLP18206 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.61■□□□□ 0.89
VCLP18206 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.61■□□□□ 0.89
VCLP18206 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VCLP18206 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.61■□□□□ 0.89
VCLP18206 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCLP18206 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VCLP18206 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.6■□□□□ 0.89
VCLP18206 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.6■□□□□ 0.89
VCLP18206 AC061975.6-201ENST00000579045 1553 ntBASIC20.6■□□□□ 0.89
VCLP18206 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
VCLP18206 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.6■□□□□ 0.89
VCLP18206 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.6■□□□□ 0.89
VCLP18206 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VCLP18206 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
VCLP18206 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.6■□□□□ 0.89
VCLP18206 AC073111.5-205ENST00000641717 521 ntBASIC20.6■□□□□ 0.89
VCLP18206 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCLP18206 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VCLP18206 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.59■□□□□ 0.89
VCLP18206 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.59■□□□□ 0.89
VCLP18206 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.59■□□□□ 0.89
VCLP18206 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.59■□□□□ 0.89
VCLP18206 AC010536.3-201ENST00000620306 533 ntBASIC20.59■□□□□ 0.89
VCLP18206 AC231657.2-201ENST00000624556 255 ntBASIC20.59■□□□□ 0.89
VCLP18206 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VCLP18206 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCLP18206 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCLP18206 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCLP18206 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCLP18206 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VCLP18206 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.58■□□□□ 0.89
VCLP18206 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
VCLP18206 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCLP18206 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCLP18206 AC026185.1-201ENST00000445748 174 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms