Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PRKCAP17252 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.98■□□□□ 0.63
PRKCAP17252 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRKCAP17252 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKCAP17252 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.97■□□□□ 0.63
PRKCAP17252 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PRKCAP17252 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.97■□□□□ 0.63
PRKCAP17252 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PRKCAP17252 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRKCAP17252 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRKCAP17252 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRKCAP17252 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRKCAP17252 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRKCAP17252 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCAP17252 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.96■□□□□ 0.63
PRKCAP17252 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.96■□□□□ 0.63
PRKCAP17252 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCAP17252 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PRKCAP17252 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRKCAP17252 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PRKCAP17252 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.95■□□□□ 0.62
PRKCAP17252 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.95■□□□□ 0.62
PRKCAP17252 AC137761.2-201ENST00000561729 223 ntBASIC18.95■□□□□ 0.62
PRKCAP17252 AC145350.3-201ENST00000569033 163 ntBASIC18.95■□□□□ 0.62
PRKCAP17252 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 UBE2DNL-204ENST00000602536 740 ntBASIC18.95■□□□□ 0.62
PRKCAP17252 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.95■□□□□ 0.62
PRKCAP17252 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
PRKCAP17252 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.95■□□□□ 0.62
PRKCAP17252 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PRKCAP17252 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRKCAP17252 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PRKCAP17252 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PRKCAP17252 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PRKCAP17252 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
PRKCAP17252 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.94■□□□□ 0.62
PRKCAP17252 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.94■□□□□ 0.62
PRKCAP17252 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.94■□□□□ 0.62
PRKCAP17252 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.94■□□□□ 0.62
PRKCAP17252 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.94■□□□□ 0.62
PRKCAP17252 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PRKCAP17252 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRKCAP17252 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.94■□□□□ 0.62
PRKCAP17252 AL049796.1-201ENST00000565336 1766 ntBASIC18.93■□□□□ 0.62
PRKCAP17252 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRKCAP17252 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRKCAP17252 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRKCAP17252 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRKCAP17252 AL020996.1-203ENST00000536896 2307 ntBASIC18.93■□□□□ 0.62
PRKCAP17252 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRKCAP17252 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms