Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
HIST1H1DP16402 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST1H1DP16402 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.43■□□□□ 0.38
HIST1H1DP16402 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H1DP16402 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 AC092720.2-201ENST00000602388 1665 ntBASIC17.42■□□□□ 0.38
HIST1H1DP16402 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H1DP16402 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 UNC93B3-201ENST00000308076 687 ntBASIC17.42■□□□□ 0.38
HIST1H1DP16402 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST1H1DP16402 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H1DP16402 EEF1DP3-203ENST00000566025 782 ntBASIC17.42■□□□□ 0.38
HIST1H1DP16402 AC053503.5-201ENST00000601508 636 ntBASIC17.42■□□□□ 0.38
HIST1H1DP16402 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H1DP16402 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HIST1H1DP16402 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HIST1H1DP16402 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 AC061975.6-201ENST00000579045 1553 ntBASIC17.41■□□□□ 0.38
HIST1H1DP16402 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 AL136116.3-201ENST00000402907 1138 ntBASIC17.41■□□□□ 0.38
HIST1H1DP16402 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H1DP16402 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H1DP16402 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HIST1H1DP16402 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
HIST1H1DP16402 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST1H1DP16402 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H1DP16402 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H1DP16402 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST1H1DP16402 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST1H1DP16402 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HIST1H1DP16402 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST1H1DP16402 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 AC024257.2-201ENST00000549699 147 ntBASIC17.4■□□□□ 0.38
HIST1H1DP16402 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HIST1H1DP16402 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H1DP16402 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST1H1DP16402 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
HIST1H1DP16402 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIST1H1DP16402 TCF3P1-201ENST00000423021 1937 ntBASIC17.39■□□□□ 0.37
HIST1H1DP16402 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H1DP16402 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.39■□□□□ 0.37
HIST1H1DP16402 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms